Scomber scombrus (Atlantic mackerel): 133983055
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Entry
133983055 CDS
T10651
Symbol
ctnnb1
Name
(RefSeq) catenin beta-1
KO
K02105
catenin beta 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04310
Wnt signaling pathway
ssco04510
Focal adhesion
ssco04520
Adherens junction
ssco04916
Melanogenesis
ssco05100
Bacterial invasion of epithelial cells
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133983055 (ctnnb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133983055 (ctnnb1)
04520 Adherens junction
133983055 (ctnnb1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
133983055 (ctnnb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133983055 (ctnnb1)
05100 Bacterial invasion of epithelial cells
133983055 (ctnnb1)
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT_2
HEAT_EZ
Adaptin_N
KAP
ARMC9_ARM
Atx10homo_assoc
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
133983055
NCBI-ProteinID:
XP_062277976
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Position
7:complement(9884233..9899270)
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AA seq
781 aa
AA seq
DB search
MASQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEDDVDNQ
VMYEWEQGFNQNFAQEQVQDLDGQYAMTRAQRVRAAMFPETLEEGMQIPSTQYDTANPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAA
GILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMA
QNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLV
RAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQ
LLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFR
MSEDKPQDYKKRLSVELTSSLFRTEPMAWNETGELGLDIGAQGEPLGYRQEDPSYRSFHS
GGYGGDSMGMEPMMDHDLGGHHPGQDYPPVEGLPDLGHTQELIEGLPPGDSNQLAWFDTD
L
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccaggctgatctgatggagctcgacatggccatggagccagaccgtaaggcg
gcggtcagtcactggcagcagcagtcctacctggattcaggcatccattcaggggccacc
acaacagctccctccctgagtgggaaaggcaaccctgaggaagatgatgttgacaaccag
gtcatgtatgagtgggagcagggcttcaaccagaatttcgcccaggagcaagtacaagac
cttgatggccaatatgccatgacgcgtgcccagcgggtgcgtgcagcaatgtttccagag
actcttgaggagggcatgcagatcccctctacacagtacgacacagcaaaccccaccaat
gtccagaggctggcagagccctcgcaaatgctcaaacatgctgtggtcaatctgatcaac
tatcaagatgacgctgaactggcaaccagagccataccagaactcaccaaactactcaac
gatgaggaccaggttgtagtaaacaaagcagcagtgatggtccaccagctgtcaaagaaa
gaagcttcgcgtcacgctatcatgcgctcccctcagatggtgtctgccatcgtcaggacc
atgcagaacacaaacgatgtggagacagctcgctgtactgcaggaacactgcacaacctg
tcccatcacagagagggactgctggccatcttcaagtctggaggaataccagctctagtt
aaaatgctcggttcaccagtggactctgtcctgttctatgccattaccaccctccacaac
ctcctcctgcaccaggaaggagccaagatggctgtccgtttggctggcggtttacagaaa
atggtggctctgctcaacaaaaccaatgttaagttcctggccatcaccaccgactgtctc
caaattctggcctatggaaaccaggaaagcaagttgatcattctggccagtggtggcccc
caggcattggtcaacatcatgagaacttacacctacgagaagcttctgtggaccacaagc
cgagtgctcaaagttctgtcagtttgctccagtaacaagcccgccattgtagaagcagga
ggcatgcaggctctgggactccacctgacagaccccagccagagactggtccagaactgt
ctctggactctcaggaacttatcagatgctgccaccaaacaggaggggatggagggtctg
ctaggaactctggttcaactgctcggcagtgacgacattaatgtggtgacctgtgctgct
ggcatcctgtccaacctgacctgtaacaactacaagaacaagatgatggtctgccaggtt
ggagggattgaggcgttggttcgcacagtgctgcgggctggagacagagaagacatcaca
gaacctgctatctgtgcactgcgtcacctcacatctcgacatcaggatgctgagatggca
cagaatgcagtcagactgcactacggcctgccggtggttgtcaaattgctgcatccgccg
tcacactggccacttattaaggctacagtcggtctgatccgtaacctggctctgtgccct
gccaaccatgcccctctgagggagcagggagccatccccagactggttcagctgctggtc
agagcacaccaagacacacagagacgcaccagcatgggaggcacacagcaacagtttgtg
gagggagttcgcatggaggagattgtggagggctgcacaggagcacttcacatcctggcc
agagacgtccacaacagaatagttatcagaggactaaacaccattccactctttgtacag
ctgttgtattctcccatcgagaacatccagcgtgtagcagcgggcgtcctgtgtgagctg
gcccaggataaagaggctgctgaggccatcgaggctgagggagccaccgccccgctcaca
gagctgttgcacagccgcaatgaaggagttgccacctacgctgcagcagttttgttccgt
atgtctgaggacaaaccccaagactacaagaaacgcctctctgtagaactcaccagctcg
ctcttcaggacagaaccaatggcctggaacgagactggagagctgggtttggatatcgga
gctcagggagagcctctaggctacagacaggaagacccaagctaccgttccttccattcg
ggaggttacggaggggactctatgggtatggagcccatgatggaccatgatctgggtggc
caccaccctggccaggactaccccccagtagaggggctgcctgacctgggacacacccag
gaactgatagagggcctgccacccggtgactccaaccaactggcctggtttgataccgac
ttgtaa
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