Scomber scombrus (Atlantic mackerel): 133983074
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Entry
133983074 CDS
T10651
Symbol
pik3r4
Name
(RefSeq) LOW QUALITY PROTEIN: phosphoinositide 3-kinase regulatory subunit 4
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04136
Autophagy - other
ssco04140
Autophagy - animal
ssco04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
133983074 (pik3r4)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133983074 (pik3r4)
04136 Autophagy - other
133983074 (pik3r4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssco01001
]
133983074 (pik3r4)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133983074 (pik3r4)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133983074 (pik3r4)
Protein kinases [BR:
ssco01001
]
Serine/threonine kinases: Other
VPS15 family
133983074 (pik3r4)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133983074 (pik3r4)
Autophagy
Autophagosome formation proteins
PI3K complex
133983074 (pik3r4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR5
WDR55
HEAT
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
PK_Tyr_Ser-Thr
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
EIF3I
NBCH_WD40
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
HEAT_EZ
Beta-prop_EML
PEP5_VPS11_N
Adaptin_N
APH
ARM_TBCD_2nd
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
133983074
NCBI-ProteinID:
XP_062278010
LinkDB
All DBs
Position
7:31441412..31483876
Genome browser
AA seq
1342 aa
AA seq
DB search
MGNQLAGIAPSQILSVDSYFSDIHDHEYDKSLGSTRFFKVARAKHREGLVVVKVFAIQDP
SLPLTSYKQELEELKIRLHSCQNCLPFQKTSLTEKAAILFRQYVRDNLYDRISTRPFLNN
VEKRWLAFQILNAVDQAHKAGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPEDNPAD
FNYFFDTSRRRTCYIAPERFVDGSMFATESDQNTPLVDLTNNNQRGRGELRQAMDIFSAG
CVIAELFTEGVPLFDLSQLLAYRKGHFQTEHVLMKIEDRNIRELVAQMVQREPEKRLTAE
EYLKQQRGKAFPDIFYTFLQPYMAQFAKETFQSADERVLVIRKDIDNILHNLRGGSSSSS
SSSSSSQDGGDCVPSSREEQGLIVLVSVITSCLQTLHSCDSKLAALELTLHLAPAAGVDI
LLDRITPYLLHFCNDPVPVVRAQAVRTLAKVLALVKEVPRNDVNIYPEYILPGIAHLAQD
DATIVRLAYAENIAHLAESALRFLELVQENNVNTEQDLIGEDTEEMLLHPNENYDSELQA
LHEMVQQKVVTLLSDSENIVKQSLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWH
LRGAFFDSIVGVAAYVGWQSSSILKPLLQQGLSDTEEFVIYKALNALTCMCQLGLLQKPH
IYEFVGDIAPFMCHPNLWIRYGAVGFITVVAQHLNVADVYCKLMPHLNPFITQPIIQIDK
ELVLLSVLKEPVSRSIFDYALRSKDIGSLFRHLLLRQKKRAGSIPECPTPDDPAIAQLLK
KLLSQGMTEAEEDKLLALKDFMLKSNKAKANMGEQSHLGEAVQTGVIDLATLGITGRQVD
LVKPKAEAEDKRARKHTKQDSTMNEEWKSMFGSQEPSSAQVVMAADGPGSQIRKSTAVPS
VPVLQSVASGPAYQRRLNTCKAELQQLVQQKREQCSAERMAKQMMESAEWESRPPPPGWH
PKGLLVAHLHEHKAAVNRIRVSDEHSIFATASNDGTVKVWDSQKMEGKTTTTRSVLTYSR
IGGHVKTLTFCQGSHYLAVASDNGSIQLLAVEANKPPKSPKVQPFQTRSLDLQEDGCAVD
IHHFNSGAQSVLAYATVNGSLVGWDLRSNSNAWTLRHDLRLGLITSFTVDMHQCWLCLGT
SSGTMACWDMRFQLPISNHSHPARARIRRLLMHPLYQSSVIAAVQGNNEVSMWDMETGDR
KFTLWASSAPPLSEMQPSPHSVHGIYCSPADGNPLLLTAGSDMRIRFWDLAYPERSYIVA
GGANDSLHCPSVLYSRKIIEGTEVVQEIHSKQKSGVVEDSPRRGPESLPVGHHDIITDIA
TFQTTQGFIVTSSRDGIVKVWK
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccagctggccggcatcgccccgtctcagatcctctccgtggacagctacttc
tccgacatccacgaccatgagtatgacaagagtctgggcagcactcgcttcttcaaggtg
gcccgagccaaacaccgcgagggtctggtggtggtcaaagtcttcgccatccaggaccct
tcgctgccgctgaccagctacaagcaggagctggaggagctgaagatccggctgcactcc
tgtcagaactgcctccccttccagaagacctcgctgacagagaaagccgccatcttgttc
cgtcagtacgtgcgggacaacctgtacgaccgcatcagcaccagacccttcctcaacaac
gtggagaagcgctggctggccttccagatcctcaacgccgtggatcaggcgcacaaggcc
ggcgtccgtcacggagacatcaagacggagaacgtgatggtgaccagctggaactgggtg
ctgctcacagacttcgccagctttaagcccacctacctgcccgaggacaaccccgccgac
ttcaactacttcttcgacacgtccaggcggaggacgtgctacatcgcgcccgagaggttc
gtggacgggagcatgttcgctacggaaagcgaccagaacacgccgctggtggacctgacc
aacaacaaccagagaggccgaggggagctgagacaggccatggacatcttctctgcaggc
tgtgtgatcgctgagctcttcactgaaggcgtccccctcttcgatctgtcccagctgctg
gcgtatcgtaaaggacacttccagacggagcacgtcctcatgaagatcgaggaccgcaac
atccgagagctggtggctcagatggttcagcgggagccggagaagcgtctgacagcggag
gaatatctgaagcagcagagaggaaaagcttttccagacatcttctacaccttcctgcag
ccgtacatggctcagttcgccaaagagacgtttcagtcggccgacgaacgcgtgctcgtc
atccgcaaagacatcgacaacatcctgcacaacctgagaggaggctcctcctcctcttcc
tcctcctcctcttcgtctcaggacggcggtgactgcgtgccgagctctcgtgaggagcaa
ggcctcatcgtgctggtgtccgtcatcacttcctgcctgcagacgctccactcctgcgac
tctaagctggcggctctggagctcaccttgcacctggcgcccgcggctggcgtggacatc
ctgctggaccgcatcacgccgtacctgctgcacttctgcaacgaccccgtgcccgtcgtg
cgcgcccaggccgtgcgcacgctggccaaggtgctggcgctggtgaaggaagtgccgcgc
aacgacgtcaacatctacccggagtacatcctgccggggatcgctcacctcgcccaggat
gacgccaccatcgtcaggctggcgtacgcagagaacatcgctcacctggccgagagcgcg
ctgcgtttcctggagttggttcaagaaaacaacgtgaacacggagcaggacctgatagga
gaggacacggaggagatgctgctgcaccccaacgaaaactacgactcagagctgcaggcg
ctgcacgagatggtgcagcagaaggttgtgaccctgctgagcgactcggagaacatcgtg
aaacagtcgctgatggagaacggcatcaccagactctgcgtgttcttcggccggcagaag
gccaacgacgtgctgctgagtcacatgatcaccttcctcaacgacaagaacgactggcac
ctgagaggagccttcttcgacagcatcgtgggcgtagcggcgtacgtgggctggcagagc
tcctccatcctgaagcctctcctccagcagggcctcagcgacaccgaggagttcgtcatc
tacaaagctctcaacgctctgacctgcatgtgccagctgggcctgctgcagaaacctcac
atctacgagttcgtgggcgacatcgctccgttcatgtgtcacccgaacctgtggatccgt
tacggagcggtgggattcatcactgtggtcgctcagcacctcaacgtagccgacgtctac
tgcaaactgatgcctcacctcaaccccttcatcacccagcccattatccagatcgataag
gagctggtgctgctgagcgtcctgaaggagccggtgagtcgctccatcttcgactacgct
ctgcgctccaaagacatcggcagcctgttcagacacctgctgctgaggcagaagaagaga
gccggatccatcccagaatgccccacacccgacgacccggccatcgctcagctcctcaag
aagctgctgtcacaggggatgacggaggcggaggaggacaagctgctggcgctcaaagac
ttcatgctgaaatccaacaaggccaaagccaacatgggcgagcagagtcacctgggggag
gcggtgcagaccggcgtcatcgacctggcaacgctcggcatcaccggacgccaggtcgac
ctcgtcaagcccaaagccgaagcggaggataagagagcgaggaagcacaccaagcaggac
tccaccatgaacgaggagtggaagagcatgtttggatctcaggagccgtcgtccgctcag
gttgtcatggcggctgacggtccagggagtcagatcaggaagagcacggcggtcccatcg
gttcccgtgttgcagtcggtagcgagcggcccggcctaccagcgccgcctcaacacctgc
aaggcggagctgcagcagctggtgcagcagaagagggagcagtgcagcgccgagcgcatg
gccaaacagatgatggagagcgccgagtgggagagtcgtcctcctccacccggatggcat
cctaaaggtctgctggtcgcccacctgcatgaacacaaagctgctgtgaaccgcatcaga
gtctcagacgaacactccatcttcgccacggcgtccaacgacggcaccgtcaaagtctgg
gacagtcagaagatggagggaaagaccacgaccaccagatcggtgttgacttattctcgt
attggcggccatgtgaagacgttgaccttctgtcaggggtctcattacttggcggtggct
tcagacaacggatccatccagctgctggcggtcgaagccaataaaccaccaaaatctcca
aaagtgcagccgttccagaccaggtctttggatctccaggaggacggctgtgcggtcgac
atccaccatttcaactctggcgctcagtccgtgttggcgtacgcgaccgtcaacggctca
ttggtcggctgggaccttcgctccaactccaacgcctggacgcttcgtcacgacctccga
ctcggactcatcacctcattcaccgtcgacatgcaccagtgctggctctgtcttgggacg
agcagcggcaccatggcatgctgggatatgaggtttcagctccccatctcaaaccactcc
cacccagcacgagcacggatcagacggctgctcatgcatccactctaccaatcgtctgtc
atcgctgctgtccaggggaataatgaagtgtcgatgtgggacatggagactggagatcgt
aaattcacactgtgggcgagttctgctcctccgctttctgagatgcagccgtctcctcac
agtgttcatgggatttactgcagccctgctgatgggaaccctctgctgctaacagccggc
tctgacatgagaatcaggttttgggacttggcgtatccagagaggtcgtacatcgtagcg
ggaggagccaacgactcgctgcactgcccgtctgtcctctacagccggaagatcatcgaa
ggaactgaagtcgtacaggagatccacagcaaacagaagagcggcgtggtggaggactcg
cctcgccgcggccctgagtcacttcctgtcggacaccacgacatcatcaccgacatcgcc
accttccagaccacgcagggcttcatcgtcacctcgtccagagacggcatcgtcaaagtg
tggaagtga
DBGET
integrated database retrieval system
