Scomber scombrus (Atlantic mackerel): 133983075
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Entry
133983075 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133983075
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133983075
NCBI-ProteinID:
XP_062278011
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Position
7:32662548..32712733
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AA seq
1245 aa
AA seq
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MDQCEDREEGVPPSKSSLCGEHDSQTKAQRMQQQRADSPEPSCVSMKSDWSMGHPMTFKD
GQPADGRMQQQRADSPEPSCVSMKSDRSMGRGITFKYGQPADGRVQQQSSEVPSDQSTQQ
HQTQLDSIFMLLEENIVTFVKNELKRVQRGLSPDDPECLKSQSEDEEVLDGEEEEQRRSS
REAFLKITLHFLRRMKQEDLADCLQSRTRAAKCRRKLKSNLEKKFQCVFEGIAKAGNPTL
LNQIYTPLYITEGGTAEVNDEHEIRQIETASRKPDRPETTIREEDIFKASPGRDEPIRTV
MTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVELVHHFFT
ETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSHRQILTDVTESTSVD
VLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEVRGFTEPQKEEYFRKRFRDEE
QASTIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSRERGELPKTLTEMYIHFLVLQS
KLKNIKYDGGAETDPHWNKKSRKMIKSLGKLAFEQLQKGNLIFYESDLTECGIDIRAASV
CSGVFTQVFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFIKSGVNLLEKEQTTSWSEV
FKDKSTHLYQSAVDEALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSSSKTNQKT
VEYIKKKISENVSAERSINVFHCLNELNDRSLVEEIQQSLRSGSLSTDKLSPAQWSALVF
ILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSDCNLSERSCAALSSVLSSQS
SSLRELDLSNNKLQDSGVKKLSAGLESPNCTLETLRLSDCNFSKRSCEALSSVLSSQSSS
LRDLDLSNNKLQDSGVKKLSAGLESPHCGLETLRLSGCNLSERSCAALSSVLSSQSSSLR
DLDLSNNDLQDSGVKQLSAGLESPHCGLETLSLSACLITEEGCASLASALSSNPSHLKEL
DLSYNHPGDSGEKLLSAGLKDPHWRLDTLRMDHGGLQRLKPGVRKYACELELDPNTMNRN
LKLSDNNRKVTYVMEEDQSYPAHPDRFDSWPQLLCRNDLTGRCYWEVEWRGRVSISVSYR
GIKRKGDRADCWFGMNNQSRSLNCSDDYGYSVCHNNRTTPISSSSSSVSNRVAVYVDCPA
GTLSFYRVSSDTLIHLHTFNTTFTEPLYSGFAVWSYDSSVSLCPL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgacagccagaccaaagctcagaggatgcagcagcagagagcagactctcctgaa
cccagctgtgtgtccatgaagagtgactggtctatgggtcatcctatgacgtttaaagat
ggacaaccagctgatggaaggatgcagcagcagagagcagactctcctgaacccagctgt
gtgtccatgaagagtgacaggtctatgggtcgtggtattacgtttaaatatggacaacct
gctgatggaagagttcagcagcagagctcagaggttcccagtgatcagtctacacagcag
catcaaacacagctggactccatatttatgctgctggaggagaacatcgtcacttttgtg
aagaacgagctgaagagagtccagaggggtctgagcccagatgacccagaatgcttaaag
agtcagagtgaggatgaggaggtgttggacggtgaggaggaagagcagaggaggagcagc
agagaggcatttctgaagatcacactgcacttcctgaggagaatgaagcaggaggatctg
gctgactgtctgcagagcagaactcgtgctgcaaagtgtcgacgtaaactcaagtctaac
ctggagaagaagttccagtgtgtgtttgaggggatcgctaaagcaggaaacccaaccctt
ctgaatcagatctacacaccgctctacatcacagagggagggactgcagaggttaatgat
gaacatgagatcagacagattgaaacagcatccaggaaaccagacagaccagaaacaaca
atcagagaagaagacatctttaaagcctcacctggaagagatgaaccaatcagaacagtg
atgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggac
tgggctgaagacaaagccaaccaggacatacacttcacatttccattcactttcagagag
ctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatcacttctttact
gaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgac
ggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctgactgatgtt
acagagtccacctcacaccggcaaatcctgactgatgttacagagtccacctcagtggat
gtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataacc
acacgacctgcagcagccaatcagatccctcctgagtgtgtcggcatggtgacagaggtc
agagggttcaccgaaccacagaaggaggagtacttcaggaagagattcagagatgaggag
caggccagcaccatcatctcccacatcaagacatcacgaagcctccacatcatgtgccac
atcccagtcttctgctggatcactgctacagttttggaggatgtgttgaaaagcagagag
agaggagagctgcccaagaccctgactgagatgtacatccacttcctggtgcttcagtcc
aaactgaagaacatcaagtatgatggaggagctgagacagatccacactggaataagaag
agcaggaagatgattaagtctctgggaaaactggcttttgagcagctgcagaaaggcaac
ctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtg
tgctcaggagtgttcacacaggtctttaaagaggagagagggctgtaccaggacaaggtg
ttctgcttcgtccatctgagcgttcaggagtttctggctgctcttcatgtccatctgaca
ttcatcaagtctggagtcaatctgctggaaaaagaacaaacaacatcctggtctgaagtt
ttcaaagacaaatcaacacatctctaccagagtgctgtagacgaggccttaaagagtcca
aatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcag
actctcctacgaggtctgctgacacagacaggaagtagctcaaagaccaatcagaaaaca
gttgagtacatcaagaagaagatcagtgagaatgtgtctgcagagagaagcatcaatgtg
ttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacagtccctg
agatcaggaagtctgtccacagataaactgtctcctgctcagtggtcagctctggtcttc
atcttactgtcatcagaaaaagatctggatgtgtttgacctgaagaaatactctgcttca
gaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctgttgagt
gactgtaacctctccgagagaagctgtgcagctctgtcctcagttctcagctcccagtcc
tctagtctgagagaactggacctgagtaataacaagcttcaggattcaggagtgaagaag
ctgtctgctggactggagagtccaaactgtacactggaaactctcagactgagtgactgt
aacttctcaaagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagt
ctgagagatctggacctgagtaataacaagcttcaggattcaggagtgaagaagctgtct
gctggactggagagtccacactgtggactggaaactctcagactgagtggctgtaacctc
tcggagagaagctgtgcagctctgtcctcagttctcagctcccagtcctctagtctgaga
gatctggacctgagtaacaatgacctgcaggattcaggagtgaagcagctttctgctgga
ctggagagtccacactgtggactggaaactctcagtctgtcagcatgtctgatcacagag
gaaggctgtgcttctctggcctcagctctgagctccaacccctcccatctgaaggagctg
gacctgagctacaatcatccaggagactcaggagagaagcttctgtctgctggactgaag
gatccacactggagactggacactctcaggatggaccatggtggactgcagagactgaaa
cctggtgtgaggaagtatgcctgtgaactggaactggatccaaacacaatgaacagaaac
ctcaaactgtctgacaacaacaggaaggtgacatatgtgatggaggaggatcagtcatat
cctgctcatccagacagatttgactcctggcctcagctgctgtgtagaaatgatctgact
ggtcgctgttactgggaggtcgagtggagaggaagagtttctatatcagtgagttacaga
ggaatcaaaaggaaaggagacagagctgactgttggtttggaatgaacaatcagtcccgg
agtctgaactgctcggatgattatggttactctgtctgtcacaataacagaacaacaccc
atctcctcctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgct
ggcactctgtccttctacagagtctcctctgacacactgatccacctccacaccttcaac
accacattcactgaacctctgtattctgggtttgcagtctggtcatatgattcctcagtg
tctctgtgtcctctgtag
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