Scomber scombrus (Atlantic mackerel): 133983168
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Entry
133983168 CDS
T10651
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133983168 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
133983168 (tex10)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
133983168 (tex10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_GCN1
HEAT_GCN1_C
HEAT_MROH2B_C
HEAT_EF3_N
Cnd1
TPR_IPO5
Adaptin_N
TOR1L1_N
Vac14_Fab1_bd
TPR_CAND1
MMS19_C
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
133983168
NCBI-ProteinID:
XP_062278127
LinkDB
All DBs
Position
7:complement(17069900..17081970)
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AA seq
943 aa
AA seq
DB search
MKAKKKKRQDDFQKVKLKVGKTKPKADNATNTNFRTKGIHLTEQLKRDTSGPTTHRQLGI
NDLLSQLHHYNANVKHTALLGLRELLALNPSLLEQHLSRLLSEVAAVFTDKDGNVRVAAT
RVLRFIAQSVPAERVAPFFPLLSAHLSCAMTHIETGIQEDAMKVLDVLLEHYPALLAARP
AVLLTNFLELISHKQSSGGAKKAQDAKGRTWALSVNLSRAVTSQQWRLSVLLRLGRFLQA
VVEERPVEEGDMSGPTEGVFGSSGEGRLTPLHLIWEELPYSKVGVKVYEHSGAKPTPHST
FRLRPEVDTGTAVGESLNSAEAVQSFAATLVPLLLEVWVEASTSDSPGNSTDGAHLLSPD
AMSVMFQVLSILQLLRKLAPQQEHQDALDAWFRKEYLGEFKQHFMKNFPYGTRDTPRHKK
KVNLKRSKQTAAVPGLTVEPLALNITLCQVMVSLSQRQGLGRETDGDWLTPLRTFVRDTL
SNEVKLSYRQLHMLLGTVWKMVFTQRSKTVTEDLLAAVYFYYQQRHLTLQTRSLLLSFYS
KLYLQEQGHTHIARSKVLCRWLASLPVQLSQLGHRNPALSARLIQSIQAAASRGNKDLLN
SLQAQACRLYDPQEGVVVLLPAESQQRMVQLLYFLPKMSQSLLANLSCCCTAGRISAGLA
ASLIRIVHLRSSLSSWSVGSQEAALQDVDYISFLFSTLTGFSSDKLTSLQEAGDDSALPP
SPLSPLSLYPTQLEQFTHHWDVVEEICHCLETLGSKSQCFDILQNGICKYLIKLGVVPDS
MAAGLLRAVSRLLDLSVLPIEPVLRFLSQCCLSLLALLITLQQEAPADTNHKREAIWGAC
VSALSSVPRLLRMVLQLLRVGDLSEDELPQLGQILSMLLQHTPIHNQLLANSALLQEIIQ
HLTRYSRGSTREQWLTDLLYCYSVTVAHGSSSHRGNLGLRDMY
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccaagaagaagaagagacaggatgacttccaaaaggtcaagttaaaggtggga
aagacaaagcccaaagctgataatgccaccaacaccaacttccgcacaaagggaatccat
ctaactgaacagctgaaaagagacacaagtggccccaccacacacagacagctgggtatc
aatgaccttctgtcccagcttcaccattacaatgccaatgtgaaacatactgccttgttg
ggtttgagagagttgctggcccttaacccatctctgttagagcagcatctgtctcgcttg
ctctctgaagtggcagctgttttcactgacaaggatggcaatgtccgtgtggcagccaca
cgtgtgctcaggttcattgcgcaatctgtacccgcagaacgagtggctccatttttcccc
ctcctcagtgcccacctctcttgtgccatgactcacattgagacaggcatccaggaggat
gccatgaaggtccttgatgtgttgcttgaacactaccctgctctgctcgcggcacgtcct
gctgtgctactcactaacttcctggagttgatctctcacaaacaaagcagtggaggagct
aaaaaggctcaggatgccaagggacggacctgggcactgtcagtcaacctcagcagggct
gtgacaagtcagcagtggcggctctctgtgctcctcaggctcgggcgcttcctgcaggca
gtagttgaggaaagaccagtggaggaaggtgacatgtctggcccaactgagggagtgttt
ggttccagcggagagggccgacttacacctctgcatctcatctgggaagagctcccttac
agcaaggtcggagttaaggtttacgaacattctggggccaaaccaactccacattccacc
tttagactcaggcctgaggtggacactgggactgcagtgggcgagagtctgaattcagcg
gaggctgttcagagttttgcagctacactggtgcctcttctgttggaagtgtgggtagag
gctagtaccagtgacagtcccgggaacagcactgatggcgctcacctgctcagcccagat
gccatgtcagtaatgttccaggtcttgtctattctgcagctgctaagaaaactggcgcca
cagcaggaacaccaagatgcactggatgcatggttccgtaaagaatacctgggagaattt
aagcagcacttcatgaaaaactttccctatggtactcgggacacacccagacataaaaag
aaggtgaatctcaaaaggagtaagcagaccgcagctgtcccaggtctgacagtggagcct
ctggccctaaacatcacactttgccaggtcatggtgtccctcagccagaggcagggactc
ggccgagagacggatggagactggctgacaccgctgaggacgtttgtccgagacacgctg
agcaatgaagtgaaactgagttacaggcagctgcatatgctgcttggaactgtgtggaag
atggtgttcacacagaggagcaaaactgtgacagaggacctgttggcagcagtttatttc
tactatcagcagaggcacctgactctacagacaagatctcttctgctgtctttttacagc
aagctctacctgcaggagcaaggtcacacacacattgccaggagtaaggtgctctgtcgg
tggttggcttctcttcctgtgcagttgtcccagctgggccaccgtaacccagctctgtct
gcgcgacttatccaatccatccaggctgctgcatctcgaggcaacaaagacctgctcaat
agtctgcaggctcaagcctgcaggctctacgatccacaagaaggagttgtggttctgtta
ccagcagagtcccagcaacgaatggtgcagctgctatactttctacccaagatgtcccag
tctcttctggccaatctgagctgctgctgcactgctggacgaatctctgctggcctcgct
gcctctctgattcgtatcgtgcaccttaggtcgtctctgagcagctggtcagttgggagc
caggaagcagctctgcaggacgtggactacatcagcttcctgttctccaccctgacaggc
ttctcgtccgacaagctcacctccctgcaggaggccggcgacgacagcgccctgcctccc
tcccctctctcccccctcagcctctaccccacccagctggagcagttcacacaccactgg
gacgttgttgaggaaatctgccactgtctggaaaccttgggttcaaagtcccagtgcttt
gacatcttgcaaaatggcatttgtaaatacctgatcaagttgggggtggtgcctgacagt
atggcggctgggctgctgagagctgtatccagattactggacctgtctgtcctgcccatt
gagcctgtgctgcgcttcttgtctcagtgctgcctcagcctgctggctctgctcatcacc
ctgcagcaggaggcacctgccgataccaaccacaaaagagaggcgatctggggagcttgt
gtctcagcgttgagctctgttccccgcctgctgaggatggttctgcagttgttgcgtgtt
ggagatctgagtgaggacgagctgccacagctgggacagatcctgtcaatgctgttgcag
cacacgccaatccacaaccagctgctggccaactccgctctgctgcaagaaattatacaa
cacctgacgaggtactcccggggatcgaccagggagcagtggttgacagacttgctctac
tgttacagcgtcacagtagctcacggctcttcttctcacagaggaaacctgggccttcga
gacatgtactga
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