Scomber scombrus (Atlantic mackerel): 133983242
Help
Entry
133983242 CDS
T10651
Symbol
pals2a
Name
(RefSeq) MAGUK p55 subfamily member 6a isoform X1
KO
K24048
MAGUK p55 subfamily member 2/6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133983242 (pals2a)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
PDZ domain-containing proteins
MAGUK family proteins
133983242 (pals2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
PDZ
SH3_2
SH3_1
PDZ_2
PDZ_6
SH3_9
PDZ_Tricorn
DUF5321
Motif
Other DBs
NCBI-GeneID:
133983242
NCBI-ProteinID:
XP_062278235
LinkDB
All DBs
Position
7:complement(15907585..15918798)
Genome browser
AA seq
549 aa
AA seq
DB search
MCIFFSSAMQQVLDNLKDLPSGTGAKDIDLIFLRGVMESPIVRSLAKAHERLGEGKLQAV
RDDNVQLVTEILDSLNKRPEKDATAAELAKILQEPHFKSLIEAHDKVAAKCYEMPHTAEN
SNALLTSSLMPADAVRMIGIQKKAGEPLGVTFRVEQGEMVIARILHGSSIDRQGMLHTGD
IIREVNGREVGSNPSELQELLRDCSGSITLKVLPSYRDTPAPPQVYLKPHFNYNPATDNL
IPCKEAGLAFLKGDILHVVNKEDPNWWQACHVVGGATGLVPSQFLEEKRKAFVRRDWDTS
GTGMLCGTLTAKKKKKKMMYLTAKNAEFDRYELQIYEEVAKMPPFQRKTLILIGAQGVGR
RSLKNRLIVLNPLQYGTTVPFTSRSPREEERDGQNYCFVTRAEMEKDIKESRYLEHGEYD
GNLYGTKIDSIHEVVDTGRTCILDVNPQALKVLKTAEFMPFVVFIAAPELDTLRTMHKAV
IDAGLTTKLLTDNDLKKTVDESARIRRAYSHYFDLTIVNDNLDKAFDKLQEAVERLFIAP
QWVPVSWVY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatttttttctcttcagccatgcagcaagtactggacaaccttaaagacttgcca
tcaggcacaggagccaaagatattgacctcatcttcctcagaggcgtcatggagagtccc
atcgtccgctccctcgccaaggcccatgagcgtcttggggaagggaagttacaagccgtg
cgagatgataatgttcagctggtcacagagatcctcgattccctcaacaaacggccagaa
aaagacgctaccgctgccgaacttgccaaaatcctccaggagcctcactttaagtctttg
atagaggcccatgacaaagtggctgcgaagtgctatgaaatgccccatacggcagagaac
agcaatgctttgttgacgagttcgctcatgccagctgatgctgtcaggatgattggcatc
cagaagaaagctggggaaccattgggagtgacgttccgtgtggagcagggagagatggtg
atcgctcggatcctgcatggcagctcgattgacagacagggcatgctgcacacgggagac
ataatccgtgaggtgaacggtcgcgaggtcggtagtaaccccagtgaactccaggagctg
ctgagggactgtagtggaagcatcacactcaaagtcctgcccagctacagagacacgcca
gcacctccacaggtttatctgaagccacacttcaactataacccagccaccgacaacttg
atcccctgtaaagaggcaggcctggccttcctcaagggagacatccttcatgttgttaac
aaggaggaccccaactggtggcaggcctgtcatgttgttggtggagccactgggctcgtc
cccagtcagttcttggaggagaagaggaaagctttcgtgagaagagactgggatacttct
ggtacagggatgctctgtggaactctaactgcaaagaaaaagaagaagaaaatgatgtac
ctcactgcgaagaatgcagaatttgaccgttatgagctgcagatctatgaggaggtcgcc
aagatgccaccgttccagaggaaaacactcattctgattggagcccagggagttgggagg
cggagcctgaagaaccgacttattgtcttgaaccctctgcaatacggaaccactgtaccc
ttcacgtcacgcagtcccagagaagaggaaagagatgggcagaactactgttttgtgaca
cgggcggagatggagaaggacatcaaggagagccgttacctggagcacggcgagtatgac
ggcaacctttatggcaccaagatcgactctatccatgaagtggtggatacaggacgtacc
tgcatcctagacgtcaaccctcaggccctgaaagtgttaaagactgctgagttcatgcca
tttgtggtgtttattgctgctcctgaactggacacattaagaactatgcacaaagctgtg
atagatgctggacttactaccaaactcctcacagataacgatttgaagaagactgtggat
gagagcgcgaggatccgtcgggcgtacagccactactttgacctgactattgtcaatgac
aatctggacaaggcctttgacaagctgcaggaggcggtagagcggttattcatagcgcca
cagtgggttccagtcagctgggtctactga
DBGET
integrated database retrieval system
