Scomber scombrus (Atlantic mackerel): 133983265
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Entry
133983265 CDS
T10651
Symbol
adgrb1a
Name
(RefSeq) adhesion G protein-coupled receptor B1
KO
K04596
adhesion G protein-coupled receptor B1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04115
p53 signaling pathway
ssco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133983265 (adgrb1a)
09143 Cell growth and death
04115 p53 signaling pathway
133983265 (adgrb1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133983265 (adgrb1a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133983265 (adgrb1a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssco04030
]
133983265 (adgrb1a)
Peptidases and inhibitors [BR:
ssco01002
]
Mixed peptidases
Family P2
133983265 (adgrb1a)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Others
133983265 (adgrb1a)
G protein-coupled receptors [BR:
ssco04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
133983265 (adgrb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AGRB_N
7tm_2
TSP_1
TSP1_spondin
GAIN
TSP1_ADAMTS
TSP1_CFP_C
GPS
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
133983265
NCBI-ProteinID:
XP_062278275
LinkDB
All DBs
Position
7:complement(2953643..3071934)
Genome browser
AA seq
1612 aa
AA seq
DB search
MTSVVSWFLGQARWPLPVLLLYFVPLLLMASRSQAAPSGPESDSCSTLVQSRFFGFFLSS
SVFPSVPCSWTLQNPDPRRYTIFIKVTKPTEDCMPSQLRTFQYDSFLETTRTYLGMESFD
EVVRLCDTSAPVAFLEAGKQFLQMRKGHPRVGAAITDGDGDFKTEYLVVGKRNPSMAACQ
MLCQWLEDCLTSSTSNRPCGIMQTPCTCWEPPPQLSEGNSCYHNGVYLENCLPSVKESGK
DAEINGGWSVWGQWAQCSSECGGGIQTRTRTCQSPPEESYLCEGVVEEGRPCNSQACTGK
GRHSSRSQSLRSVDSRKRDDVDKPRSGQQSPQTVDSASGEEWSAWSVCSATCGEGWQSRT
RFCVSSSYSTQCSGPLREQRPCNNSAVCPVHGAWDEWSPWSLCSSTCGRGYRSRTRTCTP
PQFGGDACDGPEKQTKFCNIAVCPVDGVWNEWSSWSSCSASCSNGTMQRTRECNGPSYGG
SECRGEWLETVDCFLGECPVDGKWQPWSLWSGCSKTCGGGSQQRNRICYGPFFGGQLCPG
EREEVRRCAEKRCPEPHEICAEDNFSNVVWKMTPAGDTAAVRCPPNAMGLILRRCTLDEE
GIAYWENPTYMKCISNDYRSIQTLTREHLSKAQRGLVGDGVSEVMTKLRVTSSDGTSYSG
DLLAIVDVLKNMTEIFRRAYYSPSSADMRNFVQSVSNLLMEENRERWEEAQLLGPNIKEL
FRLVEDFVDVIGLRMKDFQDMYEVTDNLVLSIHKRPVVGQADINFPMKGWRGMVDWARSS
EDRVTIPKNILSTGKPDSDDSSTFVTGIVLYRNLGSILNLQRNSTVLNSKVLSVAIKPSP
ASLSAPVVVEFSHMYNGTTNQTCISWDESDSSSLLGSWSARGCKAVLVDSFRTKCVCDRL
STFAILARLNPEMNMDKTQLPSVTLIVGCGVSSLTLLLLIIIYVSVWRYIRSERSVILIN
FCLSIISSNALILIGQTQTRNKVLCTLIAAFLHFFFLSSFCWVLTEAWQSYMAVTGRLRN
RIIRKRFLCLGWGLPALVVAISVGFTKAKGYGTQSYCWLSLEGGLLYAFVGPAAAVVLVN
MVIGILVFNKLVSKDGITDMKLKERAGALQSGTHQSQKPPPMSSVIGQMTVPLYNMTLKC
AKCGVISSADVSTTATSNAMASLWSSCVVLPLLALTWMSAVLAITDRRSALFQILFAVFD
SLEGFVIVMVHCILRREVQEAVKCRVVDRQEDTNGDSGGSFQNGHAQLMTDFEKDVDMAC
RSGTMKRSSLQGEEKASAGTLTLQKGSNFNTMPASMAKVHLQNVADYTSHTLTLRREKGA
TKGISTELPGAKSIYICDGELFKQLDGELPRGNGEGSSSEGTGKGPGYVILPTNNTGTLK
PAKGKEEQTAKYNISIEQLPQTRLIHLANSANSEPMPGFGLKSLPADQVSVSCSERDSPA
HNLQNMPRDSHVANNMCDGGDSGNSGVMSKSETVSTLSMSSLERRKSRYAELDFEKIMHT
RKRHQDMFQDLNRKIHSADKDRESPPVDAKAAKRWSVSSASSDKTNMSDKQQTPSKRAWE
GIRKTHSPPSWVRKDLETVVASPLEMQTVEWEKTSATIPLVGQEIMDLQTEV
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgttgtttcttggtttctcggccaagcaaggtggcctctccctgtgctgctc
ttgtatttcgtccccctgctgctgatggccagtcgtagccaggcagccccctcaggtcca
gagtcggactcctgctccactttagttcagagccgcttctttggcttcttcctgtcgtcg
tcagtgttccccagcgtgccttgttcctggaccctgcagaaccccgatccacggcgctac
accatcttcatcaaggtgaccaaacctaccgaggactgcatgccatcacagctacgcacc
ttccagtacgactccttcttggagacgacgcgcacctacctgggcatggagagcttcgac
gaggtggtgaggctttgcgacacctctgcgccggttgccttcctggaagccgggaaacag
ttcctccaaatgaggaagggacatcctcgggttggtgcggccatcacagacggtgatggg
gatttcaaaacagaatacttagttgtggggaagcgtaaccccagcatggcggcatgtcag
atgctctgccagtggctagaggactgtctgacctccagcacatcgaacaggccctgtggc
atcatgcagacgccatgtacatgctgggagcctccgccacagctcagtgagggaaatagc
tgctaccacaatggagtttacctagaaaactgtttacccagcgtgaaagagagtggaaaa
gatgcagagataaatggtggttggagcgtgtggggtcagtgggctcaatgcagcagcgag
tgcggaggcgggattcaaacccggacccggacctgtcagtcaccccccgaggagtcctac
ctgtgcgagggagtggtggaggagggccgaccctgcaactctcaagcctgcaccggcaaa
ggtcggcacagctctcgcagccaatcgcttcgctcagtggacagccgcaagcgtgatgac
gtagacaagcctcgcagcggacaacagagcccccagacagtagactcagcttcaggtgag
gagtggtcagcgtggagtgtgtgttctgccacatgtggggagggctggcagagtcgcact
cgtttctgtgtgtcctcctcctacagcacccagtgtagtgggccactgcgagagcagaga
ccttgcaacaattctgccgtttgtccagtgcacggcgcttgggacgagtggtcaccgtgg
agtttgtgttcatcgacctgtggccgaggttacaggtccagaacacgaacctgcaccccc
cctcagtttgggggagatgcctgtgatggtccagagaaacagaccaaattctgcaacata
gccgtctgtccagtggatggagtgtggaatgagtggtccagctggagttcctgctcagcc
tcctgctccaacgggaccatgcagcgaaccagggagtgcaacggcccctcgtacggaggc
tccgagtgcagaggagagtggttggagaccgtcgactgtttccttggggagtgcccggtg
gatggcaagtggcagccgtggtctttatggtcgggctgttctaaaacgtgtggagggggg
agccagcagagaaacagaatttgttacgggcccttttttggagggcagctttgccccgga
gaacgagaagaggtccgacgctgtgctgagaagagatgtccggaacctcatgaaatatgt
gcggaggacaacttttccaacgtcgtatggaagatgactccagctggggatacagcagca
gtacgctgtccccccaatgccatggggcttatcttgcgccgctgcacccttgacgaggag
ggcatcgcctactgggagaatcccacctatatgaaatgcatttccaatgactatcgcagc
atacagactttgactcgggaacatttgtccaaagcccagcggggccttgtgggagatgga
gtttcggaggtgatgactaagctgagggtgacgtccagtgatgggacgagttacagcggt
gatttgctggccatcgtggacgtactgaagaacatgacagagatcttcaggagggcatat
tacagccccagcagtgcagacatgaggaactttgtgcagtcagtcagcaatctgctgatg
gaagagaacagagaaagatgggaggaagcacaactgctggggccaaacatcaaagagctg
ttccgtctggttgaggactttgtggatgtcattggcctgaggatgaaagactttcaagac
atgtatgaagtcaccgataacctagttttaagcatccacaagcgtccagtggtgggtcag
gcagacatcaacttccccatgaagggctggaggggcatggtggactgggcccgcagctcc
gaggacagggtcaccatcccaaagaacatcctgtccaccggtaaaccagattcagacgac
tcctcgacgtttgtgacaggcatcgttctgtacagaaaccttggcagcattctcaatctg
cagagaaacagcacagtgcttaactccaaggttttgtcagtggccatcaaaccctcccct
gcctccctgtctgctccggtcgtagtcgagttctctcacatgtacaacggcacaaccaat
cagacctgtatatcctgggatgagagtgacagctcctctctgctgggatcctggtctgcc
aggggctgcaaagccgtgctagtcgactcattcagaaccaaatgcgtgtgtgacagactg
tccaccttcgccattttagcacggctaaaccccgaaatgaacatggataagacacaactc
ccgtccgtgacgctgatcgtgggctgcggagtgtcttcgctgacgttgttgctgctcatc
atcatctatgtgtctgtctggaggtacatccgatccgagcgctccgtcatcctcattaac
ttctgcctctccatcatctcctccaacgccctcattctcatcggacagacacagacacgg
aataaggtgttgtgcaccctgatcgcggcgttccttcatttcttcttcctgtcgtcgttc
tgctgggttctgacggaggcgtggcagtcctacatggctgtgacgggtcgcctcaggaat
cgcatcatacgcaagcgtttcctgtgtctcggctggggtctccctgctctcgttgtggcc
atctcagtgggattcactaaggcaaagggatatggaacacagagctactgctggctgtct
ctggaaggaggtctcctctatgcatttgttggacccgctgcagctgtagtcttggttaac
atggttattgggattctcgtttttaacaaactggtgtccaaagacggcattactgatatg
aaactaaaggagagggcgggggctcttcaatcaggaacacatcagtctcagaagccccct
cccatgtcatcagtgattggtcagatgacagtgccactgtacaatatgacgctcaaatgt
gccaagtgcggagttatctcttcggctgacgtttccaccacagctaccagtaacgccatg
gcgtcactgtggagctcctgtgtggttttgcccctcctggcccttacgtggatgtcagcc
gtcctcgccatcaccgaccgacgctccgcgctcttccagattctctttgctgtctttgat
tcgctggaagggtttgtcattgtcatggtgcactgcatcctgcgcagagaggttcaggag
gcagtaaagtgtcgtgtggtggaccgccaggaggacactaacggagactcaggaggatct
ttccagaatggccacgctcagctgatgactgactttgagaaagacgtcgatatggcttgc
agatcaggcactatgaagagatcatccctccagggggaggaaaaggcctctgctgggact
ctcacccttcagaagggttctaactttaacaccatgccagccagcatggctaaggttcac
ctccagaatgtggccgactacaccagccacactctgacgctgcgcagggagaagggcgcc
accaagggaatcagcacagagctgcctggcgccaaatcaatctacatctgcgacggtgag
ctcttcaagcagctggacggagagctgcctcgaggtaatggggagggcagcagctccgag
ggcactggcaaaggcccgggatacgtcattctaccgaccaataacacgggcaccctgaag
ccagccaaggggaaagaggagcagacagccaagtataacatcagcattgagcagctgcct
cagacgaggctcatccacctggctaactctgccaacagcgagccaatgcctggctttggg
ctgaagagcctgcctgctgaccaggtcagtgtgtcatgttcagagagagactcacctgcg
cacaacctgcagaacatgcccagagactcccatgtggccaacaacatgtgtgatggagga
gactcaggaaactccggtgtgatgtccaagagtgagaccgtctccacactgtccatgagc
tcgctggagagacgaaaatcacgctatgcagagcttgactttgagaagataatgcacacc
cggaaacgccaccaggacatgtttcaggacctgaacaggaagattcacagtgcagacaag
gatagagaatctccacctgttgacgccaaagctgccaaaagatggagtgtgtcctctgcc
agcagcgacaagaccaacatgagtgacaagcagcagaccccgagtaagagggcgtgggag
ggcatcaggaagacccactcccccccatcctgggtgaggaaggacctggagacggtggtg
gcctccccccttgagatgcagacggtagagtgggagaagaccagcgcaaccattcctctg
gtaggccaggagatcatggacctgcagacagaggtgtga
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integrated database retrieval system
