Scomber scombrus (Atlantic mackerel): 133983274
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Entry
133983274 CDS
T10651
Symbol
atp6v1c1a
Name
(RefSeq) V-type proton ATPase subunit C 1-A
KO
K02148
V-type H+-transporting ATPase subunit C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00190
Oxidative phosphorylation
ssco01100
Metabolic pathways
ssco04142
Lysosome biogenesis
ssco04145
Phagosome
ssco04150
mTOR signaling pathway
Module
ssco_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
133983274 (atp6v1c1a)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
133983274 (atp6v1c1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133983274 (atp6v1c1a)
04142 Lysosome biogenesis
133983274 (atp6v1c1a)
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Paralog
GFIT
Motif
Pfam:
V-ATPase_C
Memo
Folliculin
NRIP1_repr_1
Motif
Other DBs
NCBI-GeneID:
133983274
NCBI-ProteinID:
XP_062278286
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Position
7:6014654..6023034
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AA seq
383 aa
AA seq
DB search
MTEFWLISAPGEKTCQQTWDKMMAATTRTNNISTNHKFNIPDLKVGTLDVLVGLSDELAK
LDSFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKN
ISEIISKQVTQIDNDLKTRASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSE
YLITLLAVVPKTSYMDWQKAYETLAEMVVPRSTNLLFEDNDSGLFSVTLFRKAMDDFKHK
ARENKFTVRDFQYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHIKAL
RVFVESVLRYGLPVNFQAMLLQPTKKNMKKLREVLNDLYKHLDSSASGIIDSAMDIPGLN
LSQQEYYPYVYYKIDCNLLDFKV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacagagttttggttgatttctgctccgggagagaagacctgccagcaaacatgggac
aaaatgatggcagcaaccacacgtaccaacaacatctccaccaaccacaagttcaacatc
ccagacctcaaggtggggacactggatgtcttggtcgggctttcggatgaactggccaaa
ttagactcctttgttgagagtgtggtgaagaaggtggctcagtacatggccgacgtgctg
gaagacagtcgagacaaagtgcaggagaacctgctggccaatggagttgatcttgtcacc
tacatcacaagatttcaatgggacatggcaaaataccccatcaaacagtccctgaaaaac
atctctgaaatcatctcaaagcaagtaacccagattgacaatgatttgaagaccagagca
tcagcttataacaacctgaagggaaacctgcagaacttagagaggaagaatgcggggagt
ctgctgaccaggagcctggctgacatcgtcaaaaaggacgactttgtgctcgactccgag
taccttattactctgctggctgtggtaccaaagacgtcatacatggactggcagaaagca
tatgaaacacttgctgagatggtggtgccacgatccaccaatctgctttttgaggacaat
gacagcggactgttcagcgtcactctgttcaggaaagccatggatgacttcaaacacaaa
gccagagagaacaagttcacagtgagagacttccagtacaatgaggaggagatgaaggca
gacaaagaggagatgacacggctctctactgataagaagaagcagtttggcccgctcgtt
cgatggctcaaagtgaacttcagtgaagccttcatcgcgtggatccacatcaaagctctg
agggtctttgtggaatctgtcttaagatacgggctgccggtgaactttcaggccatgctg
ctgcagccgaccaagaagaacatgaagaagctgagggaggtgctcaatgatctgtataaa
catcttgacagcagtgcatccggtatcattgattcggcgatggacattccaggcttgaat
ctgagccagcaggagtattatccctatgtctactacaagatcgactgcaacctgttagac
ttcaaagtttaa
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