Scomber scombrus (Atlantic mackerel): 133983279
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Entry
133983279 CDS
T10651
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133983279
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133983279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
133983279
NCBI-ProteinID:
XP_062278293
LinkDB
All DBs
Position
7:complement(6666817..6672417)
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AA seq
230 aa
AA seq
DB search
MMSPLVARLLLLVCLALPLYGVEKVRNRGYRKDPDADKFGSCLQGPAGTSGRDGNPGANG
IPGTPGIPGRDGLKGEKGECISEIFEEPWRPNYKQCAWNSLNYGIDLGKVADCTFTKMRT
DSTLRVLFSGSLRLKCKNACCQRWYFTFNGAECTAPLPIESIIYLDQGSPELNSTINIHR
TSSVEGMCEGVKAGLVDVAVWVGTCADYPRGDASTGWNSVSRIIIEELPK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctcctctcgttgcccgcttgctgctccttgtgtgcctggctttacctctttat
ggcgtggaaaaggtgagaaatagaggataccgaaaggatcctgacgcggataagtttggc
agctgccttcaggggccagcaggaacctctggcagagacggtaacccaggggccaacggc
atcccgggaacgccgggcatccctggtcgcgacggactcaaaggtgagaaaggcgagtgc
atcagcgagatcttcgaagaaccctggagacccaactacaagcagtgtgcctggaactca
ctgaattatgggatcgacctgggtaaagtagctgactgcacgttcaccaagatgcgtaca
gacagcaccctcagagtcctcttcagcggctccctcagactcaagtgtaagaacgcgtgc
tgccagaggtggtacttcaccttcaacggagcagagtgtacagcacctctgcccatagag
tccatcatctacttagaccaaggaagtccagagctcaactcaaccatcaacatccacaga
acttcctcagttgaagggatgtgtgagggtgtcaaagcagggctggtggacgtggcggtg
tgggtggggacctgcgctgactatcccagaggtgatgcatctacagggtggaattctgta
tccaggattatcattgaggaacttcctaaataa
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