Scomber scombrus (Atlantic mackerel): 133983314
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Entry
133983314 CDS
T10651
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Other basic domains
RF-X
133983314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133983314
NCBI-ProteinID:
XP_062278351
LinkDB
All DBs
Position
1:complement(18904829..18923521)
Genome browser
AA seq
1453 aa
AA seq
DB search
MLINPAGPLHPVYTSRPDPSRPVPRPAVMAEDDPQQLQTDRGAGLLPAGLQGAEATALQL
RIKNSICKSVQSKVENILLDVDKFSDIEKLYLYLKLPSGPNSSSPDKSDQSALSSSRTQQ
VHAFNWIRNHLEEYPETSLPKQEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARR
LGMRGKSKYCYSGLRKRPFVHMPSLPSLDLHKPGDGLQCDVLESSGQLSSIKEEVRYAAC
DLVCEWAQKVLKRQFDTVEDLARFLIDSHYISNKSLAALTVMTGTKTDITTPQMVSAFIP
TAEAHSFQPQIKTLSSPTIDAKQQLQRKIQRKQQEQKLHSPLPGEAQMKRASVPCSSPVP
PSPQPTIGIVVAAVPSPITVQRSRQLMSPSPVGAAESKVLPINFQMVTQPAQPLKQSPKP
PQNILASSVGERTARQRYAQILPKPSSTTAITLRSPSTMIIASSPIKTVMTTCHVSPVSL
VKMAAISLAPNSSNTTTSLTNTSLQPASAGISSTTVAEDVGSSQNMSASAGHVLAPVARR
GQATDAHTIDVEMEVEAIHKNSQNQNPSSLILTQGEMVNRAGGAVQRAASVPIPQTRGFL
GLEEIPGSKYNGNPSSSTNTVVPSEGSNNNANNTSTLHLSPSTQNTSAVSTLNTSRVPSC
GESSSATSAKEGFLSIKSFRKRSGLSPVVSPIKRVFMLQQPVEGAAGFGYGIRNTVGNVP
RPGGPARPESAPATREVEMTMNSILPTQVQTLCTSSIRASGFYTVAKTQSSMQRKNTSTV
METSTSVSHALLQQQQGHTMANVHGIPNNVCFQKHSGVSDLRSSNSTTGSLEGAQQQTYT
QSTPTNEPMDFLDQASSSGQLPMQTDMDYFNFDDDVTQDSIVEELVQMEEQMKLNNLQEF
GDSVTLQGQQAVMPGNVMSTNQTMTAFYHAGNSSRGNPIQTPTPTPTPTSEMMGGFQGLT
GESPCSRIASTTPVDSALGSSRHTPAGTPHSNCSSTVPPSPVECRNPFAFTPINSSITGF
LDGSTVSSSPVKPMQRPMATHPDKTRLEWMNSSYNSSVGSLNKSNSGMGILPSYQGLIDD
HFQKPHAFAIPHARHHDSHFGRLTPISPVQQQVASMTNMTKQEGFAVPAPLDNKSTNTPA
TTATFRCRSVSPAVHQRTVIGNTGNSGLPNIPRSGVSPFNSAVTAEVLNIFANSQGNLGV
SSLAQRSRSVPLNIMMQTELLPMPGQQCSTKNITNVLLSKLDGDHDDTLRGLGINNLPSS
YTARMNLTQILESDPNLSCTDDHLSLMASNSTSSCKLQRPNYLIGNAINEQMILSAGDSQ
VQSASGKQQAQSMLLGLNSQQHQQLDFSVKDLLTDNSLTAGNQLMEQVSELTTGGTDFPC
EIRMTSDLSSSINDLNSLDTNLLFDPNQQQYQNAASEELANDQLFQQITSETAHSSGLEW
LESKDHPTVGLIG
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgttgattaaccctgccgggccactacaccccgtctacacctcccgtccggacccgtcc
cgtcccgtcccgaggcccgctgtgatggcggaggacgacccccagcagctgcagacggac
cgcggggcgggcctgctccccgccgggctgcagggcgctgaggccaccgctttgcagctc
aggatcaagaactccatctgcaaatctgttcaatcaaaggtggaaaacattctgctagat
gttgacaagttctcagacattgaaaaactctacctctacctgaagttgccttctggtccc
aacagcagcagccctgataaaagtgaccagagcgccctgtcatcaagccgcacgcagcag
gtgcatgcattcaactggatccgcaatcatttagaggaatacccggagacctctctcccc
aaacaggaggtctatgatgaatacaagagcttctgtgacaatctgaactatcacccactc
agtgctgcagactttggaaaaatgatgaaaaatgtcttcccaaacatgaaggcgcgtcga
cttggcatgagaggaaaatcaaaatattgctacagtggactaaggaagaggccttttgtt
cacatgccatctttacccagtctggatctacacaaaccaggagatggactccagtgtgat
gtactggagtcatctggacagctgagcagcataaaagaagaggtgcgatacgcagcttgt
gatctggtgtgcgagtgggcccagaaggtgctgaaacgccagttcgatactgtggaagac
ttggctcgcttcctaatcgacagccactatatcagcaacaagtccttggcagctctcaca
gttatgaccggcactaaaacagacattacgactcctcagatggtctcggcgttcatcccc
actgctgaggctcattcctttcagcctcaaataaagaccttgtcatcacccaccattgac
gcaaagcagcagctccagaggaagatccagaggaagcaacaggaacagaagctgcattca
cccttacctggagaggcccaaatgaagagagccagtgtgccttgcagtagccccgtccct
ccatcacctcagccaaccataggcattgtggtcgccgctgtcccgagccccatcacggta
cagaggagcaggcagctgatgtctcccagtccagtgggagcagcggagagcaaagtgctg
cctattaacttccaaatggtgacccagccagcacagccactgaaacaaagccccaaaccc
ccccaaaatattctagccagctcagtgggggaacgcacagctcggcagcgctatgcacag
atcctgcccaagccttcatctacgactgctatcactttgcgttcgccctcaaccatgatc
atcgccagcagtcccattaagactgtgatgactacgtgtcatgtcagcccagtcagtctg
gtcaaaatggcagccatatcgcttgcacccaacagcagcaacaccaccacttcccttaca
aataccagtttgcagccggcatctgcaggcatcagcagtacaacagttgcagaggatgtt
ggctctagtcaaaacatgagtgcctctgctggccatgttctggccccggtggccaggcgg
ggtcaggctactgacgctcataccatcgacgttgaaatggaagttgaagctatacacaag
aacagccaaaaccaaaatcccagcagtctcattctgactcaaggagaaatggttaatagg
gctggaggagctgtgcagagggctgccagtgtgcccatccctcagacgagaggcttcctg
ggcctggaggaaatacccggctctaaatacaacggaaacccctcctcaagcaccaacact
gtggtgcctagtgaaggcagcaataataatgctaataatacaagcactttgcacttatct
ccctccactcagaataccagtgctgtctctacactgaacaccagcagagtaccttcatgt
ggggaaagcagcagtgcaacatcagcaaaggaaggcttcttgtctattaagagcttcagg
aagcgctcaggcctcagcccagtcgtttctccaatcaaaagggtttttatgctgcagcag
ccagtagagggcgctgctggttttggatatgggatcagaaacacagttggtaatgtcccc
cgcccaggtggtccagctagacctgaaagtgctcctgccaccagggaggttgagatgacg
atgaactctatcttgcccactcaagtccaaacactatgcacttcctctattagagccagt
ggcttctacactgttgccaaaacacagagctcaatgcagaggaaaaacacttccactgtt
atggaaactagcacctcagtcagtcacgcattactacagcaacagcaggggcacacgatg
gctaatgtgcatggtatacctaataatgtctgcttccagaaacattcaggtgtcagtgat
cttaggagttcaaactcaactacagggagcttggagggagctcaacaacagacctacact
cagtccacccccactaatgaacccatggattttttggatcaagcttcatcgtcgggtcag
ctccctatgcagacagatatggattactttaactttgatgatgatgtaactcaggacagc
atcgtagaggagctggtgcagatggaagagcagatgaaactgaacaacctgcaggagttt
ggagacagcgtcacattgcaaggccaacaggctgtgatgccaggcaatgtgatgtccacc
aatcagacaatgactgctttctatcacgctggaaacagcagcaggggcaacccaatccaa
actccaaccccaacacccactcccacatcggaaatgatgggaggattccaaggcctgacc
ggagagagcccgtgctcccgtattgcctccacaacccccgtggacagtgctctgggaagc
agtcgtcacaccccagctggtactccacactccaactgtagcagcactgtgcctcccagt
ccagtggagtgcagaaaccccttcgcctttacacccatcaactcaagcatcactggtttc
cttgacggcagcaccgtctccagcagccctgtcaagcccatgcagaggccgatggccacc
cacccagacaagaccaggctggagtggatgaacagcagttacaacagcagcgttgggagc
ttaaacaagtctaacagtggaatgggaatcttacccagctatcagggcctcatagatgac
cactttcagaagcctcacgccttcgccatccctcatgcacggcaccatgacagccatttt
ggccgcctgactcccatctcgcctgtgcagcagcaggtagccagtatgactaacatgacc
aagcaggagggttttgctgtgcctgcccctctggacaacaaatccaccaacactcccgct
acaactgcaacctttcgatgtcgcagtgtaagccctgctgtacatcagaggaccgtcatt
ggaaacacaggaaacagtggccttcccaatatcccccgatcaggtgtgtctccctttaac
tctgcagtgacagctgaagtgttaaacatctttgccaacagtcagggaaaccttggggtg
agcagcttggctcagaggagccgctctgtgccactcaacatcatgatgcaaactgagcta
ctgcccatgccgggccaacagtgcagcactaaaaacatcaccaatgtcctgttgagcaag
ctggatggggaccacgatgacaccttgcgaggtctgggcatcaataatttaccctctagc
tacacggcacgtatgaacctcacacagatccttgagtctgaccccaacctctcctgcact
gatgaccacctcagcctgatggcctccaactccaccagcagctgcaagttgcaaaggcca
aattacctcatcggaaatgctattaatgaacaaatgattctctctgcaggtgacagccaa
gtacaatcagcctctggaaagcagcaggcccagtccatgctgctaggtttaaactcacag
cagcatcagcagttggatttctccgttaaagacctcctaaccgacaacagcctcactgct
ggcaatcagctcatggaacaggtgtcggagctaactacagggggaacagatttcccttgt
gaaatcagaatgacatcggatctctccagtagcatcaatgaccttaactcactggacaca
aaccttctgtttgaccccaatcagcagcaatatcaaaatgccgcttcagaggagttggca
aacgatcagctgtttcaacaaatcaccagcgagacggcacattcgagcggacttgagtgg
cttgaaagcaaagatcatccaactgttgggttgattggttga
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