Scomber scombrus (Atlantic mackerel): 133983344
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Entry
133983344 CDS
T10651
Symbol
cgnl1
Name
(RefSeq) cingulin-like protein 1 isoform X1
KO
K21110
cingulin-like protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133983344 (cgnl1)
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Motif
Pfam:
Myosin_tail_1
MTR4-like_stalk
CCDC39
IFP_35_N
Motif
Other DBs
NCBI-GeneID:
133983344
NCBI-ProteinID:
XP_062278387
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Position
1:19058161..19087382
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AA seq
1320 aa
AA seq
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MESYRVTGIPNSGPQRGFTQPSHSSRPHSNGAGTYGLSIRVQGIDGHPYVVLNNQDRGPQ
PYIHPNSNGYIETEGSFIENYQEYDFGGRKESGSNSPFMEYRSQKMMHPTDPQNGVADSQ
GKNPSTLLNFQKHPEILQPYDPETNSLNIEGVHSLPSRPVSLAETGNKPQRSSSTPTVSP
VPHVRSSSLNKDKAPSQPDKRQSPFQIQANTAHPKPKTQPESLPPVQVAESQTKSQPQVA
QPQSKPRFTNLNPPQSKTTSKTQPPHQPVPSAQPQPSNVSSPSSEQNKTPCRSPSSMSSA
NSSLERPRREPDVLPLRRTDSSGPVLQSSSRSRHSSTSSTSKVLLDEQMEALYADTINRH
ENRRYIPFLPGSGRDIDTGSIPGVDELIEKFDGKDGSQQRRGRAGRRNRINPEDRKRSRS
ADSAFGLREGSSFLDEPSRHRGTSMEHVLRPSQLRLQKTAGGQDSLLMAVDNRAESRAPS
RVTSAPGSPQSTISKGVGYIQGYKKPQTRSSSLPFKSKEGEDSTSLAGKVSTTSLSTSLS
KSSSSADKKASTEADVQATPDLLKGQQELSQQTHEETAKQILFNYLKDGSNDNDETTKRK
VNLVFEKIQTLKSRATASAQGDNKSLNLTAQTKALQDQYAELEKEKAQLKRQLEEQSMKT
QADKKAAAGLKELQEECKRLKEKLDKTEAELQTTVEELFQVKMDREQYQTQIRDLQDQLS
EMHDELDSAKKSAADGEKDMIMADMMQLKVEMQEALLAKEDQEEVLRRRERELTALKGAL
KEEVAAHDQEVDKMREQYEKEISKLQASLEEAKQSSASAVREKTEVEAAKGAAEGQAGRL
TLETERLRRRAQELENEVAKLNRIIDEAKLQESRLGDRSGRLEREKKQLEESLAEIKEQE
EEMSRANRALTIRLEDVQRNFAKLSSEHKELEERLQEEKVQKEQFKNMKNDIEDERRLLD
RTIDKLQREMNDIVEASQSSTRELQEQIDIYKEKNRRELAELQKLLKERGQELDKYLLAN
KTLQEELSRREEDLRQCQQERDEAVDSERTLDIKVQDLEAEAQTNAHTKEDKSRHLKLME
ERIAQLELDLDEERHSGDQLMDRIDRGREQVEQMRNELLQERASRQDLECDKMALERQNK
DLKSRVSHLEGSQKSNKEGLVTQLENRVQELEERLEGEERERANLQLVNRRLERKVKEMM
MQVEEEHHSMQDQKDQLNLRLKALKRQMDEAEEEIDRLEHGKKKLQRDLDEQQEANEQLQ
SQLKALRSEIRRKSTSAPLLNNLDDDDDDDISTDGETYFSSSSGYKRSSSQDNMLSTFTL
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtacagagtgaccggcattccgaacagcggaccacagcggggctttactcaa
ccatcccactcctccaggccccacagtaatggagctggtacatatggtctcagcatccga
gtccagggtatagatggacacccctatgtagttctgaacaaccaggacaggggtcctcaa
ccctatatccaccccaacagtaatgggtacattgaaacagaagggtcttttattgagaac
taccaggagtatgatttcggagggcgcaaggagtctggatccaacagtcccttcatggag
tacaggtcacagaagatgatgcatcctactgaccctcaaaatggcgttgcagattcacaa
ggaaagaacccatctacgcttctgaactttcagaagcatcctgagatactgcaaccgtat
gatccagagaccaactccctgaacattgaaggggtccacagtctgccttcaaggcctgtg
tccctggctgagactggaaacaaaccccagagatcctcttccacaccaacagtttctcct
gtgccccatgtcaggtcatcaagcctgaacaaggataaagctccttcacagccagacaaa
aggcaatctcccttccagatccaggccaacacagcccatcctaagcccaagacacagcct
gagtctttgccaccagtccaggtcgctgagtctcaaaccaagtctcaaccacaagtggcc
cagccgcagtccaaacctcgcttcacaaacctgaatccacctcagtccaagacgacctct
aaaactcagcctccccaccaaccagtgccttcagcccagcctcagccctccaacgtgtca
agtccctcaagtgagcaaaacaagaccccgtgcagatcccccagttctatgagcagtgcc
aactccagcctcgagcgcccccgccgtgagcccgatgtccttcctctacggaggaccgac
tccagtggacctgttcttcagtcctcttctcgctcccgccactcttctacatcttccacc
tcgaaggtccttctggatgaacagatggaggccctgtatgcagacaccatcaaccgccac
gagaaccggcgctacatccctttcctccctggttcgggcagggacatcgacacaggctct
atacctggtgttgatgagctaattgagaagtttgatggcaaagatggcagccaacagcgg
aggggcagagctggacgcagaaacagaatcaatccagaggacaggaagcgctcacgcagt
gcagacagtgccttcggcctgcgagaaggctctagctttttagatgagccaagccggcac
cggggcacatcaatggagcatgtccttcgtccttcacaactacgactgcagaagacagcc
ggcggtcaagactccttgctcatggctgtcgataacagggccgagtccagggctccatct
cgtgtcaccagcgcgcccggctccccacaaagcaccatctctaaaggtgttggttacatc
cagggatacaaaaagccgcagacacgctcctcttctctgccattcaagagtaaagagggc
gaagacagcacctctttagctggaaaggtttctacaacatcactgtcaacgtcgctatca
aagtcgtcttccagtgcagacaaaaaggccagcacagaggcagatgtacaggcaacacct
gatcttctgaaaggccagcaggagctttcacaacaaacacatgaagagactgcaaaacaa
attttgtttaattaccttaaggacggaagcaacgataatgatgaaacaactaagagaaag
gtcaaccttgtctttgagaagattcagaccttgaagtctcgggccacagcgagtgcacaa
ggcgacaacaaatccttgaacctcactgcacagaccaaagccctccaggaccaatatgct
gagctggagaaagaaaaggctcaactgaaaagacaacttgaggaacaaagcatgaagact
caggctgacaagaaggcagctgccggtttgaaggagctgcaggaggagtgcaaacgtctg
aaggaaaaactggacaaaacagaagccgagcttcagaccacagtcgaagagttgttccaa
gtgaagatggacagggagcaataccagacacagatcagagacctgcaggaccagctgtca
gagatgcacgatgagctggactcagccaagaagtcagctgctgatggagagaaagacatg
atcatggcggacatgatgcaactgaaggtagagatgcaggaagcactcttggccaaggag
gatcaggaggaggtgctgaggaggcgagagagggagcttacggccctgaaaggagccctg
aaggaggaagtggccgctcacgatcaggaggtggacaagatgagggagcagtatgagaag
gagataagcaagctgcaagcgtctttggaggaggccaagcagagcagtgcatccgctgtc
cgtgagaagactgaagtggaggcagccaagggtgcggcagagggccaagcaggacggctg
accctagagactgagcggcttcgcaggcgggcacaggagctggaaaatgaggtggccaaa
ctcaaccgcatcatcgatgaggccaaactacaggagagcaggctgggagacagatctggc
cgactggagagagagaagaagcaactggaagagtctttggctgaaattaaggagcaagaa
gaggagatgtctcgtgccaaccgagcattaaccatccggctagaggatgtgcagaggaac
ttcgccaaactgagcagtgaacacaaggagttggaggagaggttacaagaagagaaggtt
cagaaggagcagttcaagaacatgaaaaatgatatcgaagacgagaggaggctgctggac
cgtaccatagacaaacttcagagggagatgaatgatattgtggaggcgtcacagtcgtcc
actcgggagctgcaggagcagattgatatttataaggagaagaaccgtcgggagctggcc
gagctgcaaaagcttctgaaagagcgaggacaggagcttgacaagtatctactggccaac
aaaactctgcaagaagagctttcacgacgggaggaggacctgcggcagtgtcagcaggag
cgagacgaggctgtggacagtgagaggacgttggacataaaggttcaagatctggaggcg
gaggcccagacaaacgcccacactaaagaagataaatctcgacacttgaaactcatggag
gaaaggattgctcagctggagttggacctggatgaggagcgccacagtggagaccagctg
atggacaggatagaccggggaagagagcaggtggagcagatgaggaatgaactcctgcag
gagagggctagcagacaggacctggagtgtgacaagatggctctggagagacagaacaaa
gacctgaaaagcagagtgtctcatctagagggctcccagaagtccaacaaagagggtctg
gttactcagctggagaatcgtgtacaggagctggaggagaggcttgagggggaggaaagg
gagcgtgccaacctgcagctggtgaaccgcagactagagaggaaggtaaaagagatgatg
atgcaagtggaggaagagcatcactcaatgcaagatcaaaaggaccaattgaatctgcgt
ctgaaggccctgaagaggcagatggatgaggctgaggaggagattgaccgactggagcac
ggcaagaagaagctgcagagagacctggacgagcaacaagaagccaatgagcagctccag
agtcagctcaaagctctgcgaagtgaaatcaggcgtaagagcacctctgctccactcctc
aacaacctggacgatgacgacgacgatgacatcagcactgatggggagacatacttcagc
tcatcttcagggtacaaacgctcttctagtcaggacaatatgttgtccaccttcactctg
taa
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