Scomber scombrus (Atlantic mackerel): 133983416
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Entry
133983416 CDS
T10651
Symbol
nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03440
Homologous recombination
ssco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133983416 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
133983416 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssco03032
]
133983416 (nbn)
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133983416 (nbn)
DNA replication proteins [BR:
ssco03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
133983416 (nbn)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
133983416 (nbn)
BRCA1-C complex
133983416 (nbn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
133983416
NCBI-ProteinID:
XP_062278473
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All DBs
Position
7:complement(17506498..17517439)
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AA seq
854 aa
AA seq
DB search
MWILTALQPGGEIHYLSSSKEYTVGRKNCEIILPNDQSISRAHAHLTATDQTLTVKDTSK
YGTFVNSQRLSENTPVNLKSGDSITFGVFHSKFSVDHLKLVVCSSCLDNEGKVSLSQALL
SLGGKVVNSWSPDCTHLAMHSVKVTIKTIAALLCCRPIVKPEFFSELSRDIQQKLPAPKA
ESFTPEIDEPSLIKEDVNLRAVPERKQLFNGKIFIFLNAKQLKRLSAAVSFGGGRSQLLE
EGFLPRDLLESPQSCVVDVTSGSSQTLLPPSTTDWTNSVKNIVQRKGLRVITESEIGLAA
IYASCDKYCNPSSVIPDSESASKVAPRIPSASLSQHVAVDETVLPAASQNITAYAANTET
SQRTELCEVSRVTTVGETPEKRPNQKTSQLGRSTLTAQKIATQFIVADTMSSSFNTVENT
DSQRKKPESKLIGGGSNGKGFQTSLPKTNGGMKTFLQKQSPQKNSAQTSPQKQSSLTSFF
QPVHKKRPLEDELSAVMSEPKRPVLESSFSLQASDTSVTSKEISARSDRVPAATSQTPLG
SAADLFTGRSEAPSDRVSHAAKRESLSRKRKGKEEEIQIDELESIMSEDMDWFDEQPSGN
QGPQARMHRSTENKQALTTMEALSSSKRQRVQREESGVTNQRLQVGLKKESGTNKGQSQQ
TEQHIVSIKTEPLYPSENRTTNHESRKPPKVSSASKNQNLKPFEEDEQSFIEDLDLLKAE
IIQSEEKTEAPMKPVTIKQEAQESKIEEDLPKKLILVEFRSLTMNAPPKTKPQQTQGNGY
AKNFKCFRKMQVPGTYSSPRIIGGSDLLVHNKGKNSDLDEFLKDAAEEERQTRREESVGD
DLFRYNPTKLTKRR
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactgacagccttgcagcctggaggtgagatccactatctctcctccagtaag
gaatacacggtggggcgcaagaactgtgagatcatcctgcccaacgatcagtccatcagc
cgggctcacgctcatctcactgctactgaccagactctgactgttaaggacacctctaag
tacggcaccttcgtgaacagccagcgcctgtcagagaacacaccagtgaacctgaagtca
ggggacagtatcacatttggggtttttcacagcaaattcagtgtggatcatctgaagcta
gtggtgtgttcttcgtgtttggacaatgaaggcaaggtgtcactctctcaggccctgctg
tctttgggtggaaaggtagtcaactcgtggtctcctgactgcacccacctggccatgcat
tctgttaaagtcaccattaagactattgctgctctgctgtgctgtcgtcccattgtgaag
ccggagttcttctcagagctcagcagagacattcagcaaaagttacctgctcctaaagct
gagagtttcacccctgagatcgatgagcccagcttgattaaagaggatgttaacctcaga
gcggttccggagcgcaaacagctgttcaacggaaagatcttcatttttctcaatgctaaa
cagcttaagcgtctgagtgctgcagtgagttttggaggtggcaggagccagctgctggag
gagggtttcctgccccgcgacctgctggagtctccacagagctgcgtggtcgatgttaca
tctggcagctcccaaactctgcttcctccttcgaccacagactggacaaactctgtgaag
aatattgttcaaaggaaaggccttcgggtcatcacagagtctgaaattgggttggctgcc
atttacgcttcctgtgacaagtactgcaatccatccagtgtaataccagactcagaatca
gcatcaaaggtggcacctagaataccaagtgcttctctgtcacaacacgtagcggtggat
gagaccgtgttacctgcggcgtctcagaacatcacagcgtatgcagctaacacagagaca
tcacaaaggacagagctttgtgaggtgtccagggtgacaacggtaggagagactcccgag
aagaggccaaaccagaaaaccagtcagcttggtcgatctacactcacagctcagaaaata
gccactcagttcatcgtggctgacacaatgagctcatcattcaacactgtggagaacaca
gactcccagaggaagaagcctgagtccaaactgataggaggtggcagtaatggcaagggg
ttccagacatctcttcctaagaccaatggtggtatgaagacgtttctacagaagcagtcg
ccccagaaaaattctgcacaaacttccccacagaaacagtcatctctcaccagcttcttt
cagccagtacacaagaaaaggcctctggaggatgagctctctgctgtgatgtccgagcca
aagcggcctgtccttgaatcatccttcagcctacaggcttcagacacatcagtcacatct
aaagaaatttctgcacgttcagacagagtccctgcagccacgtcccagactccactgggg
tcagcagctgatctgttcactggacggtcagaggctccctcagacagagtctcccatgct
gccaagagggaatcactgagcagaaagaggaaggggaaggaagaggagatacagatagat
gaactggagtctataatgtctgaggatatggattggtttgatgagcaaccgtcaggtaac
caaggcccacaagcaagaatgcacagatcaactgaaaataaacaggctttaactactatg
gaggccttatcttcaagcaaaaggcaacgagtccaacgagaagaaagtggagtaaccaac
caaaggctgcaggtgggcctgaaaaaagaatcgggtacaaataagggccagagccaacaa
actgaacagcatattgtgtccatcaagaccgagccgctttatccatcagaaaacaggaca
acaaatcatgagtccagaaaacctccaaaggtgtcatctgccagtaaaaaccagaactta
aaaccttttgaagaggacgagcagtctttcattgaggatttagatctactgaaagcagag
attattcaatctgaagaaaagactgaggcacctatgaaacctgttacgatcaaacaggag
gcccaagaatcaaagattgaagaagaccttcctaaaaagctgattttggtggagtttaga
tctctcactatgaacgcacctcccaaaaccaaaccacaacagacgcagggcaacggctac
gcaaagaacttcaaatgcttccgtaagatgcaagttccaggtacatatagctcaccacgc
atcattggagggtctgatctgctggttcacaacaagggcaagaactctgatctggatgag
ttcctgaaagatgcagctgaggaggagcgtcagaccagacgggaggagtcagtaggcgat
gacctcttcaggtacaaccccaccaaactaaccaagagaagatga
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