Scomber scombrus (Atlantic mackerel): 133983421
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Entry
133983421 CDS
T10651
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133983421 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133983421 (trip13)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
133983421 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_25
AAA_14
Viral_helicase1
KAP_NTPase
AAA_24
NPHP3_N
TIP49
AAA_28
AAA_5
AAA_33
NACHT
RNA_helicase
AAA_17
Cytidylate_kin
ATPase_2
TsaE
AAA_7
RuvB_N
AAA_30
bpMoxR
ABC_tran
ATPase
AAA_11
SLFN-g3_helicase
DUF815
IstB_IS21
AAA_19
Rad17
Zot
Mg_chelatase
PduV-EutP
DUF6393
Sigma54_activat
nSTAND1
NB-ARC
PhoH
AAA_3
NTPase_1
Motif
Other DBs
NCBI-GeneID:
133983421
NCBI-ProteinID:
XP_062278480
LinkDB
All DBs
Position
7:complement(16085577..16091253)
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AA seq
433 aa
AA seq
DB search
MEVGNQKQEVHVEVIVKSQSCSYTSLYFVFCLYFSTAKLSEVKIHILSLLNRHSMIFGNY
RWTEFDDDFLRKHVESVAIVDIEEMITQPLDLKNCSVSVHIFTLNEDGPSTLSLEEEEEL
SAANHWLLPAAEFHGIWESLVYESGVKTQLLDYVTTTIYFSDKNVDSNLISWNRVVLLHG
PPGTGKTSLCKALAQKLSIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQL
IDDKDALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTS
NVTEKIDLAFVDRADIKQYIGPPSEKGIYNIYLSCLEELMKCQIVYPRQQLFTMFELETM
GFAKSEVSEHSLKLRNVAIKSKGLSGRALRKLPFLAHTLFVKAPTVTLERFLDAMDRAVD
RQKEEQANLVNAV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgggaaaccaaaaacaagaggtccatgtggaggtcattgttaaatctcaaagt
tgcagttatacttccctgtactttgtcttttgtttatatttcagcactgctaaactgtct
gaggtgaagatacacattctgtctctgctgaaccgccacagcatgatatttggaaactac
agatggacggaatttgatgatgacttcctacgcaaacatgtggagtctgtggctatagtt
gatatagaggaaatgataacacagccgcttgatctgaagaattgctctgtctccgttcac
atcttcactctgaatgaggatggacccagcacgctcagtttggaggaggaagaggagctt
tcagcagccaatcactggctactgccagcagctgaatttcatggcatctgggagagtctg
gtatatgagagtggagtcaaaacccagctcctggattatgtcacaacaacaatttacttc
tcagataaaaatgttgacagcaacctgatttcctggaaccgtgttgtgctgcttcatgga
cctccaggcacaggaaagacgtcactttgtaaagctcttgcccagaaactgtcaatcagg
ctgtctagtcggtattcttatggtcaatttgtcgagataaacagccacagcttgttctca
aagtggttctcagagagcggtaaactggtcacaaagatgtttcaaaagatccaacaactg
attgatgacaaagacgctcttgtgtttgttttgattgatgaggtggaaagtcttacggca
gcgaggaatgcctcccaagcaggaacagaaccatctgacgccatccgtgtggtcaactct
gtcctcactcaattagaccaaatcaaacgacattccaatgtcgtgatcctgacgacctcc
aatgtgacagaaaagattgacctggcatttgtggacagagctgacatcaagcaatacatc
ggacctccgtctgagaagggcatctacaacatctacctctcctgcctggaggagctgatg
aagtgccagatcgtctaccctcggcagcagctgtttaccatgtttgagctcgagacaatg
ggctttgcaaagagtgaggtgtctgaacacagtctgaagctgaggaacgttgctataaaa
agcaaaggtttgagtggaagagcactcaggaagttaccatttctagctcatacactgttt
gtaaaggcaccaacagtgactctcgaaaggtttctggatgctatggaccgagcagtggat
agacagaaagaggaacaagccaacctagtcaatgctgtctga
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