Scomber scombrus (Atlantic mackerel): 133983435
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Entry
133983435 CDS
T10651
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133983435 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PH_9
PDZ_6
Motif
Other DBs
NCBI-GeneID:
133983435
NCBI-ProteinID:
XP_062278496
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Position
7:13181897..13220679
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AA seq
545 aa
AA seq
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MAVVIATGVSGSSGVQKSGFLEVLVRERWHKVLVNLNEEAFTLSCEESCINDNVNSNGVT
NGSYLDNNNTNSNNGPQTVRTAFTDLPERVPEAIANRKRCVKVTKQEVGGLGISIKGGKE
NKMPILISKIFKGLAADQTQALYVGDAILLVNGMNLRDSTHDEAVQALKRAGKEVTLEVK
YMREATPYVIKGSPVSEIGWETPPPESPRLGSTSITSTSDPLSPLPQPSLSLQGDRRCIP
LKMCYVTRAMTTPDPENRQLELHSPDARHTVVLRCPDQPSALTWFSAMHSVTFTLAQRAL
AEVMQNTTRTGVAGSKEIRHLGWLAGKTESEKECWKPVLVVVTEKDLLLYDSLPRGKEAW
QSPAHTYPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIETYLFRAETTKDLSLWTR
HIVNGCHTSAEMIKEVTTSCLYRGQECRLVIHYEQGFSVLAESKRGDGENEEDRGAHTPT
RPRVLLSYPYEKLKMSSDDGVRMLFLDFGGKEGEIQLDLHSCPKPIVFILHSFLSAKISR
LGLVA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtaattgcgacaggagtttctggttcctctggagtgcaaaaaagtggattt
ctggaggttttggtgcgagagcggtggcacaaagttttggtcaacttgaacgaggaagcg
ttcacattaagctgtgaggagagctgcattaacgacaatgtcaactctaacggcgttacc
aacggatcttacctcgacaacaataacaccaactctaacaacggcccccaaactgtgcgc
accgcgttcacggacctaccggagcgagtgcccgaggcgatcgccaacagaaagcggtgc
gtcaaggtgaccaagcaggaggtcgggggactcgggatcagcatcaaaggtgggaaggag
aataaaatgcccatcctcatcagtaagatattcaagggactcgcagcggaccagacccag
gctctgtacgtcggggacgccatcctgttagtgaacggtatgaacctgcgggactcgacc
catgacgaggctgtgcaggcgctgaaacgggccgggaaagaggtgactctggaagtcaaa
tacatgcgcgaagcaactccgtacgtcataaagggatcccctgtgtcagagatcggatgg
gaaacaccccctcctgagtctccccgcctaggcagcacttccatcacctccacttctgac
cctctgagtcctctaccccagccctccctgtctctgcagggcgacaggaggtgcatacca
cttaagatgtgttatgtaaccagagccatgactacaccagaccctgagaacagacaactg
gagctgcattcccctgacgccaggcacaccgtagtgctgcggtgcccagaccaaccatct
gccctgacctggttctctgccatgcactctgtcacattcactctggcacagcgggcgctg
gcagaggtcatgcagaacacaaccaggacaggggttgctggcagcaaagaaatacgacac
ctgggatggctggcagggaagacagagagtgagaaggagtgctggaagccagtgctggtt
gtggtgacagagaaagacctgctgctgtacgacagtctaccacgaggcaaagaggcctgg
cagagcccagcacacacttatccactattagcaacacgtttggtccactctggccctgac
cgggggtcgcctcattctggcacagagctgttttttgccactcgaaccggcacacgccta
ggcattgagacataccttttccgagctgagaccaccaaggatctgtctctgtggacccga
cacatagtcaacgggtgtcacacttcagctgagatgatcaaggaagtcactacaagttgt
ctttaccggggtcaggagtgccgacttgttattcactacgaacagggcttctctgtgttg
gctgaatccaaacgtggagatggggagaatgaagaagacagaggagctcacactcctacc
agaccacgagtgctcctctcctacccctatgaaaaactaaagatgtcctcggatgatgga
gttcgaatgctcttccttgactttggagggaaagagggggagattcaactggacctccac
tcatgtccgaagccaatcgtcttcatcctccactccttcctctctgctaagatctcccgc
cttggtctggtggcctga
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