Scomber scombrus (Atlantic mackerel): 133983479
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Entry
133983479 CDS
T10651
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133983479 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133983479 (washc5)
Membrane trafficking [BR:
ssco04131
]
Protein recycling
Others
WASH complex
133983479 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DUF3106
Motif
Other DBs
NCBI-GeneID:
133983479
NCBI-ProteinID:
XP_062278555
LinkDB
All DBs
Position
7:complement(10253337..10267610)
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSRGNAIIAELLRLSDFIPPVFRLKDKSDQQKYGDIICDFSY
FKGPEYYEGKLEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYIVDLNRYLDDLHEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDHKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQAGAKRPVNYPESYFQRVPISNTFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFSPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
VEAWEPYKAAKTALNYTLDSANIKEQATRYAASMESLRPQVQQLLKEGFLREEIILDNIP
KLLNCLRDCNVAIRWLMLHSAESAYDPNNKRLRQIKEQVLNDSKYNPKILFQLLLDTAQF
EFTLKEMFKQMLTEKQIKWESFKKEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQANSADLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIVKLQIHDIMEVPTRLDKDK
LKDYSQLGARYEVAKLTHDISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAY
ALHKGLIFNPKAKPSELMPKLKDMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSVHQSTHIPIPKFPSVDESATFIGRLCREILRITDPKVTCYI
DQMNTWYDLKSHQEVTNNRLFSEIQNTLGTFGLNGLDRLLCFMIVKELQNFLTMLQKTIL
RDRAVVDVFKAMLGAVNPVQGIVANASKVYATAVAKTQKIWGAYLEAIMKVGQMQILRQQ
IANELNYSCKFDSKHLGAALENLNKSLLADIEAHYHDPSLPYPKEDNTLLYEIAAYLEAA
GIHNPLNKIYITTKRLPYFPIINFLFVIAHLPKLQYSKNQGMTCRKATDPVDWPPLVLGM
LTLLKQFHSRYTHQFLALIGQFIRSIMEQCTSQKIPDMPSDVVGALMFLEDYVKYTKLSR
KVAEAHVPSFIFDEFRTIL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcctggcagagaacaacctgtgcggccaggccatcctcaggatagtgtcc
agaggaaatgccatcattgccgagctcttgcgcctctctgacttcatccctccagttttc
aggctcaaggacaagagtgaccagcagaaatatggagacattatctgtgacttcagctac
tttaagggtccagagtattatgaggggaagctggaagccaaacctgaacttcaggaccta
gatgaggagtttagagagaacaacattgagattctatcgaggttctatctggcttttgag
agtgtccacaaatatatagtggatcttaacagatatttggatgacctacatgagggtgtt
tatattcagcagacccttgagactgtgcttctaaatgaggatgggaaacagctcctatgc
gaggctctctacctatatggagtcatgttgctggttattgaccacaaaattgaaggagag
gtcagagaaaggatgcttgtttcttactatagatacagtgccgcccgttcatcggccgac
tccaacctggatgacatctgtaaactcctgcgcagcactggctactccagccaagctgga
gctaaacgaccagtcaactacccagagagctacttccagagggttcccatcagtaacacg
tttattagcatggttattgggaggctgcgctccgacgatatatacaaccaagtgtctgct
tatcctctaccagagcatcgcagcacagccctggctaaccaggcagccatgctctatgtg
tgcctttacttcagcccctccatactgcacacccagcaggccaagatgagggagatagtg
gacaagtacttccctgacaattgggttatcagtatctacatggggatcacggtgaacctg
gtggaagcctgggaaccgtacaaagctgccaagactgctctcaactacaccctggactct
gccaacatcaaagagcaggccacccgctatgcagctagcatggagagcttgaggcctcag
gtgcaacagctgcttaaggaaggtttcctcagggaggagatcatcttggacaacatcccc
aaactgctcaactgtctgagggactgcaatgtggcaatccgctggctgatgctgcactct
gcagagtcagcttatgacccaaacaacaagcgactgcgtcagatcaaagagcaagtgctc
aacgactccaagtacaaccccaagatcctcttccagctcctgctagacaccgctcagttt
gagttcactctcaaagagatgttcaagcagatgctgacagagaagcagatcaagtgggag
agcttcaagaaggagggatcagagagaatgactgagctggccgaagtcttctcaggcgtc
aaaccgcttaccagagtggaaaaaaatgagaacttacaagcctggttcagagaaatctca
aagcagatcgaatctttgaactatgaggactctacggctgctgggaggaaaacagtccag
ctcatacaagctctggttgaggtccaggagttccaccagttggagtctaacctgcaggtc
tgtcagttcttggctgacaccagaaagttcctgcaccaaatgattcgcaccatcaatatc
aaggaagaagtcctcattactatgcagatagtcggggacttatcatacgcatggcagata
attgacagcttcacatcaattatgcaggagagcatcagagtcaacccgtccatggttaca
aaactgagagctacatttctgaagctggcatctgctctggatcttccattgctgcgtatc
aaccaggccaacagtgctgacctgctgagtgtttcacagttctactcaggagaactggta
gcttatgtcagaaaggtgctgcagatcatcccagagagcatgttcacctctctggctaag
atcgttaagcttcagatccatgacatcatggaggtgcccacgcggctggacaaggacaag
ctaaaggactactctcaactcggggctcgttatgaagtggctaaactcacccatgacatc
tccattttcactgagggcattctgatgatgaagaccactttagttggaatcattaaggtg
gatcctaagcaacttttggaagatggcatcaggaaggagctggtgaagagggtggcttat
gctctgcacaaaggattgatcttcaaccccaaagctaagcccagtgagctgatgcccaag
ttaaaagacatggcagccaccatggatgggttctacaggtcgtttgagtacatccaggac
tatgtcagcatttacggcctcaaaatctggcaggaggaggtgtcccgcatcatcaactac
aatgtggaacaggagtgcaacagcttcctcaggactaagatccaggactggcagagtgtg
caccagtccacccacatccccatccccaagtttccctcagtggatgagtctgccaccttc
atcggccgtctctgcagagagatccttcgaatcactgatccaaaggtaacatgctacatt
gaccaaatgaacacctggtatgatctgaagagccaccaggaggtgaccaacaacaggctg
ttctctgagatccagaacaccctgggtacatttggcctcaatggactggaccgcctgctc
tgcttcatgattgttaaggagttgcagaacttcctgacgatgcttcagaagaccatcctg
agggacagggctgtggtggatgtctttaaagccatgctgggtgctgtcaacccagttcag
ggcattgtggcaaatgccagcaaagtgtatgccactgctgtcgccaaaacccagaagatc
tggggcgcatatctagaggccatcatgaaggttggtcagatgcagattctcagacaacag
attgctaatgagctgaactattcctgcaagtttgactccaaacacctgggtgctgccctg
gaaaacctcaacaagtctctgctggcagacattgaggcccattaccatgacccatctctg
ccctaccctaaagaggacaacactcttctgtatgagattgctgcctacctggaggctgcc
ggcattcacaacccactcaacaagatctacatcaccacaaagcgccttccctactttccc
atcatcaacttcctgttcgttattgcgcacctgcctaaacttcagtacagcaaaaaccaa
ggaatgacgtgcaggaaagccacagacccagttgactggcctccgttggtgctcggcatg
ctcaccctgctcaagcagttccactccagatacacacatcagttcttggctcttattggt
cagttcatccgctctatcatggagcagtgcacaagtcagaagatccctgacatgccttct
gatgtggtgggagctctgatgttcttggaagactatgtgaagtacacaaaactgtcgcgc
aaggtggctgaagcccatgtgcccagtttcatttttgacgagttcagaacaatactgtga
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