Scomber scombrus (Atlantic mackerel): 133983571
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Entry
133983571 CDS
T10651
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133983571 (nr1d2a)
Nuclear receptors [BR:
ssco03310
]
1. Thyroid hormone like
1D. Rev-Erb
133983571 (nr1d2a)
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NCBI-GeneID:
133983571
NCBI-ProteinID:
XP_062278684
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Position
7:23059449..23066216
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AA seq
601 aa
AA seq
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MPEEMGTAKPGGVIAYISSGSAPESCMSTSPSSGYLSTSPPLSRPSLPSRAVGMVVDIAP
PAKNGPRTGHGMEKAGRSSTSAKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFF
RRSIQQNIQYKKCLKMENCIIMRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRM
LLEMQNAMNNMMSNNSQLHSMLHGHQSPTLPMESLTSDASPSPSSSSSSDSPSCSNPSSP
QCPQDSESVVSMDTNSSSASSCASDSGEDEAVVSVSSRQHQDAFAYSQQRSLRQEQVSPS
PVTAAQETACDSRMEEQQEGWNSWNNNVVMRGYQHSSYSNSQHVTNTAFREERGVYQQQQ
QQLNSAPSCGPSEDSQRQHEFITQTASSGYNGPTNSVNNRAHLVCPMNTSPYVDPHKPSQ
EIWEEFSMSFTPAVREVVEFAKRIPGFRDIPEHDQVSLLKAGTFEVLMVRFASLFNMVDR
TVTFLSGKRYSLDTLRSLGAGELLNSMCEFSEKLMALRLDSEEMSLFTAVVLVSADRSGI
QDLNAVEALQDKLIRALRNLVMQNQGEEAATTFTKLLLKLPELRSLNNMHSEELLSFKVH
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggaaatggggacagccaagcctggaggagtcatcgcctacatctcctcaggc
tccgccccagagtcctgtatgagcaccagcccaagcagcggctacctttccacatcgccg
cctctctctcgcccctcgctgcccagcagggctgtgggcatggtggtggacatcgctccg
cctgccaagaacgggccaagaaccggccacggcatggagaaggccgggcgctcctccaca
tccgccaagagcagcatcaccaaaatcaatggcatggtgctgttgtgtaaggtttgcggt
gatgtggcctcgggcttccactatggcgttcatgcctgcgagggctgcaagggcttcttc
aggagaagcatccagcagaacatccagtacaagaagtgtcttaagatggagaactgcatc
atcatgaggatcaacaggaaccgctgccagcagtgccggttcaagaagtgtttgtccgtc
ggcatgtccagagatgctgtcagatttggtcgcatcccaaagagggaaaagcagaggatg
ctgctggagatgcagaacgccatgaacaacatgatgagcaacaacagccagctgcacagc
atgctgcacggccaccagagcccgacgctgcccatggagtccctgaccagcgacgccagc
ccctcgccctcctcttcctcctcctccgattccccatcgtgctccaacccctcctccccg
caatgcccccaggactcggagtctgtggtttccatggacaccaactccagctcagcctcc
tcttgcgcatcagacagcggcgaggatgaggctgttgtctcagtgagcagcaggcagcac
caagatgccttcgcatacagccagcagaggtccctgcgacaggaacaggtctccccatcg
ccagtcacagctgcccaggagacggcgtgtgacagtcgtatggaggagcagcaggaaggc
tggaacagctggaacaacaatgtcgttatgagaggttaccagcacagttcatacagtaac
agccaacacgtcaccaacactgctttcagggaggagaggggagtttaccagcagcagcag
cagcagctcaacagcgcccctagctgtgggccatcagaagacagccaaagacagcatgaa
tttatcacacaaactgcctcaagtggttacaatggaccaaccaacagtgtgaataataga
gcacacttggtatgtccgatgaacacctcaccctacgtggaccctcacaagcccagccag
gagatctgggaggagttctccatgagcttcacacccgccgtgcgggaggtggtcgagttc
gccaagaggatcccaggcttccgcgacatccccgagcacgaccaagtcagcctgctgaaa
gctggaactttcgaggtgctgatggtccgattcgcctctctgttcaacatggtggatagg
acggtgaccttccttagtggcaaacgttacagccttgacacgctacggtcgctcggcgcc
ggcgagctgctcaactccatgtgcgagttcagcgagaaactgatggcgctgcggctggat
tccgaggaaatgagcctcttcactgctgtggtgctcgtctcagccgatcgctcaggtatc
caggaccttaacgcagtggaggccctgcaggacaaactgatccgggccctgcgaaacctg
gtgatgcagaaccaaggcgaggaggcggccaccactttcaccaagctgctgctcaaactt
cccgagctgcgctcacttaataacatgcactcagaggaactgctctccttcaaagtgcac
ccttga
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