Scomber scombrus (Atlantic mackerel): 133983606
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Entry
133983606 CDS
T10651
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133983606 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ssco03051
]
133983606 (psmc4)
Proteasome [BR:
ssco03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
133983606 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_lid_PRS2_C
AAA_3
IstB_IS21
TsaE
AAA_7
AAA_33
Parvo_NS1
AAA_18
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
133983606
NCBI-ProteinID:
XP_062278729
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All DBs
Position
7:25318624..25326781
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AA seq
417 aa
AA seq
DB search
MEDIVAVEKSPDEMPAVLSSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEYI
KDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDR
ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAV
ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG
EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ
NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE
DYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgtagctgtggaaaagagcccggacgagatgccggcagtattgagctcc
agaccccagacaggactgtccttcctggcaccagaaccagaagatctggaggacctttac
agcagatacaagaagctacagcaggagctggagtttctggaagtgcaagaggagtacatt
aaagatgaacagaagaacctgaagaaagagttcctccatgcccaggaggaggtgaagagg
atacagagcatcccacttgtcattggccagttcctagaagctgttgaccagaacacggcc
attgttgggtcaactacagggtccaactactatgtgcgcatcctgagcaccatcgacaga
gagctgctgaagcccaacgcctcagtggccctgcacaagcatagcaacgccctggtagat
gtgctccctcctgaagctgacagtagcatcatgatgctgacgtcagaccaaaagcctgat
gtgatgtatgctgacattggcggtatggacattcagaagcaggaagtcagagaagcagtg
gagctgccactcacacactttgagctctacaaacagattggcattgacccacccagggga
gtccttatgtatggacctccaggttgtggcaagaccatgttggccaaggctgtggcacac
cacactacagcggcgttcatccgtgtggtgggctctgagtttgttcagaagtacttgggt
gaaggccctcgtatggtgcgtgatgtcttccggctggcgaaggaaaatgcccctgccatc
atcttcattgatgagattgatgccattgccactaagcgttttgatgcacagactggagct
gacagggaggtgcagagaatcttacttgagctgcttaatcaaatggacggcttcgaccag
aatgtcaatgtcaaggtcatcatggccaccaacagagcagacacattggatcctgccctg
cttcgtcctggtcgtctggacagaaagattgagttccccctgcccgaccgcaggcagaaa
cgtctcattttctccaccattaccagtaaaatgaacctctcagaggaggtggacctggag
gactatgtggccagaccagacaagatctctggagctgatatcaactccatctgccaggag
gctggcatgttggcagtacgtgagaacaggtatatcgtcctggccaaagacttcgaaaaa
gcttacaagaccgtcatcaaaaaggacgagcaggagcatgagttctacaagtag
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integrated database retrieval system
