Scomber scombrus (Atlantic mackerel): 133983631
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Entry
133983631 CDS
T10651
Symbol
cdcp1a
Name
(RefSeq) CUB domain-containing protein 1a
KO
K06732
CUB domain-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssco04090
]
133983631 (cdcp1a)
CD molecules [BR:
ssco04090
]
Proteins
133983631 (cdcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDCP1_CUB_6
CUB_CDCP1_2
CUB_CDCP1_1
CUB
TMEM154
Orf78
RIFIN
DUF3377
MpPF26
EphA2_TM
DUF6377
LAX
Motif
Other DBs
NCBI-GeneID:
133983631
NCBI-ProteinID:
XP_062278761
LinkDB
All DBs
Position
7:13703004..13712075
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AA seq
825 aa
AA seq
DB search
MSSSTTRVSLQILFSFTFIVFTVSGVKKLTVTPDRGTTLSISSSQVKGCKVCTVAVRTRQ
CSTSVLLKDNAPVSLEFECSRPQDVFSVEIVRIIECNTKSCNGHIIQADSNSLPLLEYKR
KFTWNLKAFGPKAIQIDFTKTGLTQVNLSVTCPDRHTYTLQAFEHTGNVTVGKYCRTGTI
TSAQILDQGSFSVEVPAGQKLQNVQFDVSVGEEIKSLAKIKLTLPQGTSSSELFSPNYPD
SFPDDDVMEWYFQVPAKQTAFVQFLNLTQPHCLKKRTAVEYHGKGRVALVRSLTDTQPTQ
NQGDFSLMLRNCEMDRRRASSPGLSLSIKVSASRTNSPVSCSVDLRAQRGLSLHIEKLRP
ASDCEMKMNSVVKERITVPSDSVTQLSFQDCFSEDLHITTMRVIECSQLKDCPKSPVYLS
VPSLPSCLPANLSSVTWDLRPPEHGTVELASPKVALKQSLPGQPCNESIIKLAEDDGTTI
GQFCPQGAIQKVQIHTNVSVTVFRAGGKALTPSYKPVLTASLKKEITERYIFTVSPMKDT
PVLLATPGWPIGMKPYSTVSWIVNVPSKMEANLMFANLSQPKCSNRHTNIRVQRVGSVEE
DYSRREDEEAEGEISVSESFYLNMSNCMPERGDFSVITKITLQKSQNLLMTIILCVVAAL
LVIFIIVLVVVLVVVRKKKKKLNQQVSIYNPNGTSFLPGQNGFPKSREDNESHVYADIED
TLVYTHLLRKGAEMGVYGEFDTYRPFTGQTDSQKPLFSKDSEVDNADVGVYRSFRLSAQQ
GPPLPNRPPSHTQTVVDNEIYQTEDPSQEELPLKLGLRLDPEGGN
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcaacaaccagagtctctctacagatcctcttctcttttactttcattgtc
tttactgtatcaggtgtcaagaagctgaccgtcacccctgaccgaggcaccaccctcagc
atcagcagtagtcaggtcaaagggtgcaaagtgtgcacagttgctgtacgcacacgacaa
tgtagtacatctgtgctgttaaaagataacgctcctgtctcgttggagtttgagtgctcc
cgacctcaagatgttttcagcgtggagattgtacgaattatagaatgtaacacaaagtcg
tgcaacggtcacatcatccaggctgactccaactcgcttcctttgctggaatataagcgc
aagttcacctggaacctgaaagcttttggaccaaaagcaatacaaatagacttcaccaag
acaggtttgacacaggttaatctatctgtgacctgcccagacagacacacctatacactc
caggccttcgagcatacaggcaatgtgactgtagggaaatactgcaggacaggtactatc
accagtgctcagatactggatcaggggagcttttctgtggaggtcccagcaggtcagaag
ctacaaaatgtccagtttgatgtgtctgtcggggaggagatcaagtctcttgccaaaatt
aaactgactttaccacaagggacgtcgtcttcagagttgttctctccaaactaccctgac
agttttcctgacgacgacgtgatggagtggtactttcaggtcccagccaaacaaacagca
tttgttcagttcttgaacctcacacagccacattgtctgaagaagaggactgcagtggaa
taccacggcaaaggcagagtggcgttggtgcggagtctgacggacacccagccaacccag
aatcagggggacttctccctgatgctgaggaactgcgagatggacaggagaagagccagt
tctcctggactctccctaagcatcaaggtgtctgcttcaagaacaaattcaccagtgtca
tgtagtgtggacctgagggcacagaggggtctttcacttcacattgagaagttgagaccg
gcctctgactgcgagatgaagatgaactctgtggtgaaggagaggatcacagtgccatca
gacagtgttactcagctctctttccaggactgcttctctgaagacttgcacatcaccacc
atgagagtcatagaatgtagtcaacttaaagactgcccgaagtctccagtgtacctctca
gtgccttcactgccgagctgccttcccgccaatctgagcagtgtgacctgggacctccgt
cctccggagcacggcactgtggagctggcctctcccaaagtagccctcaaacagtcccta
cctggccagccatgcaatgagagcatcattaaactggcagaagatgatggaaccactatt
ggacagttttgccctcagggagccattcagaaggtccaaatccacactaacgtttcagtc
actgtgttcagagccgggggcaaagcactgacgccgtcttacaagcctgtgctgactgcc
agtttgaaaaaagagataaccgaaaggtacatattcaccgtatctccaatgaaagacact
cctgtccttttggctactcccggttggccgattgggatgaagccatactccaccgtctcc
tggattgtcaacgttccctcgaagatggaggcaaacctcatgtttgccaacctcagtcag
cccaagtgcagcaaccgccacaccaacatcagggtgcagcgagtcggcagcgtggaagag
gactacagtcgcagggaggacgaggaggctgagggcgagatcagcgtctcagagagtttc
tacctcaacatgtccaactgcatgcctgaaagaggagacttcagcgtcatcaccaagatc
accctccagaagagccagaacctgcttatgaccatcatcctgtgtgtggtcgctgctctg
ttggtcatttttatcattgtgctggtggtggtccttgtggtggtaaggaagaagaagaag
aagctgaatcagcaggtctccatctacaatcccaacggcaccagtttcctgccaggacaa
aacggcttccctaaatcgcgcgaagacaacgagtctcacgtgtatgctgacatcgaggac
acgctggtctacacgcacctgctgaggaagggggcagagatgggcgtctacggagagttc
gacacataccggcccttcacggggcaaacagactcacagaagccactgttctctaaagac
agcgaagtcgacaacgcagacgtcggggtttaccggtcgtttcggttgtcagctcaacag
ggtcctccgcttcctaacaggcctccgagccacacccaaaccgtggtggacaatgagatt
taccagactgaggacccaagccaggaggaacttcctctgaagctagggctgcggctggac
ccagaaggagggaactga
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