Scomber scombrus (Atlantic mackerel): 133983645
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Entry
133983645 CDS
T10651
Symbol
atg5
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04136
Autophagy - other
ssco04140
Autophagy - animal
ssco04216
Ferroptosis
ssco04621
NOD-like receptor signaling pathway
ssco04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133983645 (atg5)
04136 Autophagy - other
133983645 (atg5)
09143 Cell growth and death
04216 Ferroptosis
133983645 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133983645 (atg5)
04622 RIG-I-like receptor signaling pathway
133983645 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133983645 (atg5)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133983645 (atg5)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133983645 (atg5)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133983645 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF6782
Motif
Other DBs
NCBI-GeneID:
133983645
NCBI-ProteinID:
XP_062278780
LinkDB
All DBs
Position
7:28267112..28309697
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AA seq
275 aa
AA seq
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MADDKDVLRDVWFGRIPTCFTLNQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFLKVM
KTEDVEEMWFEYEGTPLKWHYPIGLLFDFHASNTVLPWTITVHFKNFPDSDLLHCQSNSV
IEAHFMSSIKEADALKHKSQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEG
GFRYIPFRIYQTLSDRPFIQKQFRPVSSDGNAHTLGDLLKEMYPAALPNDGEPKRNQVVI
HGIEPLLETPLQXLSEHLSHPDNFLHICVIPIPTD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggatgtgttgagagatgtttggttcggccggatcccaacctgcttc
accctgaaccaggatgagattactgagagagaggccgagccctactatctgttgttaccc
agagtgagctacctgacgctggtcacagacaaggtgaagaaacatttcctcaaagtgatg
aagaccgaggacgtggaggagatgtggttcgagtacgaagggacgccactcaaatggcat
tatccaataggacttctgtttgacttccatgcctccaacactgtcttaccctggaccatc
actgtgcactttaagaatttcccagacagcgacctgctgcactgccagtccaactccgtg
atcgaggctcacttcatgtccagcatcaaggaggccgacgcgctcaagcacaagagccaa
gtcatcaacgacatgcagaagaaagaccacaagcagctgtggatgggcctgcagaacgat
aaattcgaccagttctgggcaatgaacaggaagctgatggaatatcccactgaggaagga
ggcttcagatacatccccttcaggatataccagacgttgagcgacaggccgttcatccag
aagcagtttcgtcccgtttcatctgacggcaacgcacacacacttggcgacctgctgaaa
gagatgtacccagctgctctaccgaatgacggcgagccgaagcgtaaccaggtggtgatt
cacggtatcgaaccgctgctggagactcctctgcagntgctcagcgaacacctcagccac
ccggacaacttcctgcacatctgcgtcatccccatccccaccgactga
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integrated database retrieval system
