| Entry |
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| Symbol |
smarcc1a
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| Name |
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
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| KO |
| K11649 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C |
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
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| Pathway |
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| Brite |
Transcription machinery [BR:ssco03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133983656 (smarcc1a)
Chromosome and associated proteins [BR:ssco03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133983656 (smarcc1a)
PBAF complex
133983656 (smarcc1a)
GBAF(ncBAF) complex
133983656 (smarcc1a)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
7:complement(29675429..29705572)
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| AA seq |
1135 aa
MATAATTAGGTGSGGPATGPVGGGGGTAVGRKKDGGPSTKFWEGSETISQLETVRLWIGK
HYKKYVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPAKCFLDFKAGGALCHI
LGSVYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKNLVQNNCLTRPTVFLSPDIDQKQA
SKLKDTIKRHQGSITDDKSKATHHIYPSPSPQEEEEWLRPVLRKDKQVLVHWGLYPDSYD
TWVSVSEVDGDVEDPPSTDRPWKVHAKWVLDTDAFNEWMNEEDYEVDENKKPVCFRQRVY
PKEEESSRTPDRKERKANSAGKKRRRSPSPPSTPAESRKKGGKKGNPGPHWKRRGHRGEE
EDTEEDVSKDMDDSSAGASMEEGSMSKNANSKRDSENTPVKRGNVADSDDMEDDSVLSNG
KDDEDQGKAEVNRLIDASEDNVTEQTHHIIIPSYSSWFDYNCIHEIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRVHAFLEQWGLVNYQVD
SDSRPLPMGPPPTPHFTVLADTPSGLMPLNHRPPPIPPQQQMPNFPGKDKDKAMAIDLQN
FGLRTDLYNKKKAKAVTSTREWTEQETLLLLEALEMFKDDWNKVSEHVGSRTQDECILHF
LRLPIEDPYLENTESSLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAARAALEE
FSRVREEVPAELVEAHVKKVQEAARSTGKVDPAFGLESSGIAGTAPDEPEKTETTEPEKA
DTDTDSQQGDKAELKDEAEKPSESAEKSDKTEATDKVKKEGAETSEREEESEDGGEAKTA
PAEKDKEEAMETSSSDQEKDKEEKAAIDEGEEKRKKLEHDIGEGNIATAAAAALASAATK
AKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQ
AFHMEQLKYAEMKARQQMEQQAAAAAAAAAAAAQAQGQGQASGPGPHSGPPSSGMHHGGP
PPHHGGPHHGASGPHHGGPPTGHPGFPPMGHHPMGPHHPGQTGPIGPSQPMPTRMIPGPP
SAGPPPGGMPPMMPPRHPGAPNGMFPGPPAAQAEPVPAVPVVGPPAPTSGRVADN |
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| NT seq |
3408 nt +upstreamnt +downstreamnt
atggcgacggcggcgactacggcaggcggaacgggctcgggcggaccggccaccggcccg
gtcggtggtggtggaggaaccgcagtgggaagaaaaaaagacggcggaccttctactaaa
ttctgggagggttcagagacgatatcgcagctagagacggtgcggctgtggatcggaaag
cactacaagaagtatgtccagaatgactccccctccagtaaatccttggcaggccttgtg
gtccagctgctgcagttccaggaggatgcttttggacgcagggttaacaatcctgctctt
accaaactacctgccaagtgtttcctggatttcaaggctggaggagctctgtgtcacatc
ctggggtcggtctacaagtttaagagcgagcagggctggcgtcggttcgacctgcagaat
ccgtcccggatggacaggaacgtggaaatgttcttaaatgtagagaagaacttggtgcag
aataactgcctgactcgacccactgtcttcctgtcgccggacattgaccagaaacaagcc
agtaagctcaaagacaccatcaaaaggcaccagggctccatcactgatgataaatcaaag
gccacccaccacatttatccttctccatcgccacaagaagaagaggagtggctgcgtcct
gtcctgaggaaagacaaacaggtgttggtgcactggggtctctacccagacagctacgat
acctgggtatcagtcagcgaggtggatggtgatgtggaggatcctcccagcactgacagg
ccgtggaaggttcatgctaagtgggttttagacaccgatgccttcaacgagtggatgaat
gaagaagactacgaggtggacgagaacaagaaaccagtctgcttccgccagagagtctac
ccgaaggaggaggagtcttcccgtacacccgatcgcaaggagcgcaaggccaactctgcc
ggaaagaagaggagacgctcgccctcgccgcccagcactcctgcagaatcccgcaagaag
ggaggaaagaaggggaacccagggcctcactggaagcgacggggccacagaggagaagag
gaggacacggaggaggacgtgagtaaggacatggacgactcctcggccggtgccagcatg
gaagagggcagcatgtccaaaaatgcaaattcaaagagagacagtgaaaatactccagtg
aaaagagggaatgtggctgactcggatgacatggaggacgactctgtgctgtctaatgga
aaggacgacgaggatcagggcaaagctgaagtgaaccgactgatagacgccagcgaagac
aacgtgacagaacagacgcaccacatcatcatcccgagctacagctcttggtttgactac
aactgcatccatgaaattgagagaagagccctgcctgagttcttcaacggaaaaaacaag
tccaaaactccagagatatacctggcgtaccgcaacttcatgatcgacacgtatcggcta
aaccctcaagagtatctcacctccacctcctgccgcaggaacttgaccggagatgtctgc
gctatcatgagggtccatgcattcttggagcagtggggtttggtgaactatcaggttgat
tcagacagtcgccctctgcccatgggccccccacccacaccccacttcacggtgctggct
gacacaccctcaggcctcatgcccctgaaccaccgacctccaccgatcccccctcaacag
cagatgcccaacttcccaggcaaagacaaagacaaggccatggccatcgacctgcaaaac
ttcggccttcggacggacctttacaacaagaaaaaggctaaagccgtgacctccaccagg
gaatggaccgagcaggagactctactgctgctggaggctcttgagatgttcaaagacgac
tggaacaaagtgtcggagcacgttggttcacgcacccaagacgagtgtatcctgcacttc
ctgcggctccccatcgaggatccatacctggagaacaccgagtcctccctgggccctctt
gcctaccagcccatacccttcagccagtctggaaaccccgtcatgagcactgttgccttc
cttgcctctgtggtcgaccccagagtggcttctgctgctgccagggcagccctagaggag
ttctcccgcgtgcgtgaggaggtgccggctgaactggtggaggcccacgtgaaaaaggtg
caggaggcagccaggagcacgggcaaggtagaccccgccttcggcctggagagcagcggc
atcgctggcaccgccccagatgagccagaaaaaacagaaaccacagaaccagaaaaggcg
gacacggacacagactcccagcagggtgacaaggcggagttgaaggacgaggccgagaag
cccagtgagtccgcagagaagagcgacaagacggaggccacggacaaggtaaagaaggaa
ggagcggagacgtcggagcgtgaggaggagagcgaagacggaggagaggcgaagaccgct
ccagcagaaaaagacaaggaggaagcaatggagacgtcgtcctcggaccaggagaaagat
aaggaggagaaggcagctatagatgagggagaggagaagaggaagaagctggagcatgac
atcggagagggcaacattgcaactgcggccgctgctgccctcgcttctgctgccacaaaa
gccaagcacttggcggcggtggaggagaggaagatcaagtccctggtcgctctgctggtg
gagacccagatgaagaagctggagatcaagctgaggcacttcgaggagctcgagaccatc
atggaccgagagaaagaggctttggagcttcagaggcagcagctgctcaccgagcgtcag
gcgttccacatggagcagctcaaatacgccgagatgaaggcgaggcagcagatggagcag
caagctgccgccgctgctgctgccgccgccgccgccgctcaggctcaaggacagggacag
gcttcaggtcctggaccccactcagggcctccttcttcaggcatgcaccacggaggacct
ccacctcaccacggaggacctcaccatggagcatccgggccccaccacggagggccccca
accggccatcctggcttccctccgatgggtcaccaccccatgggtcctcaccacccagga
cagacaggaccaattggaccaagccagccgatgccaacccgtatgatccctggcccgccc
tctgctggcccccctcctggcggtatgcctcccatgatgcctccacgccaccccggagct
cccaacggcatgttcccaggcccaccagctgcacaggctgaaccggtacctgcagttccc
gttgttggtcctccggcgcccacgagtggacgcgtggctgacaactaa |
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