Scomber scombrus (Atlantic mackerel): 133983715
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Entry
133983715 CDS
T10651
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133983715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133983715
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133983715
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133983715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
Ldl_recept_b
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133983715
NCBI-ProteinID:
XP_062278871
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All DBs
Position
7:complement(15994937..15996302)
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AA seq
414 aa
AA seq
DB search
MTSSPGSPRRGSMIPEGILREIQINLLECKVCFEKFSTQQRERRPQNLSCGHVLCLECIR
ALSHPLLRKLECPFCRQLCSVDSTSHCQVLSDLQELLLLRSTTSSALTRRPKAGLGLATG
LRSRALYLSAAFGSWGTLINPTGIAVLGSSGTIVVVHDGEKRVAVFSPKGKKLHSFGRRG
KGIDDICYPVDVAVIPCGYVVVTDAGDKAVKVFTSRGNHVLTVKDFFQLPWGVDTDSSGL
ILVSDVQAGTLSCIKVDYTHGTTQQHQTVVSDLQHPKAVACCRGTGNTAVIEHLIDDTHP
PEKHQHTRLRVFTKDFHVLYQTDSFSLTLKSTVWLHMSVVAFDRDGDVLVIDSNQGMIWS
LRKLQSDPVLTPLVGDHLVRPGGLVSLSNMLIILDSGDHTVKSYTSKSESGPMK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcagtcctggttccccacgtcgtggcagcatgattcctgaggggatcctgaga
gagatccagatcaacttgctggagtgtaaagtctgcttcgagaagttcagcactcagcag
agggagcgcagacctcagaacctttcctgtggccatgtactctgtctggaatgcatcaga
gctctgtcccaccctctcctgaggaagctggagtgcccgttctgtcgacagctgtgcagt
gttgacagcacctcccactgccaggttctgagtgacctgcaggagctgctgttgttgcgg
agtaccacatcctctgctctaactcgcaggccaaaagcaggccttggtttggccacaggt
ttgcgatccagggctctgtacctctctgcagcttttggcagttgggggactcttatcaac
cccactggaatagctgttttggggtcttctgggacaatagtggtggtgcatgatggtgag
aagagggtggcagtgtttagcccaaagggtaagaagctacacagttttgggcgtagagga
aaaggcattgacgatatctgttacccagtggatgtcgctgtgattccctgtggttatgtg
gtggtgactgatgcaggggacaaagctgtgaaggttttcacctccagggggaaccatgtg
ttgacggtcaaggatttcttccagctgccatggggtgtggacacagacagcagtgggctc
atcttggtctctgatgtccaagccggcacactgtcctgcataaaagtagactacactcat
ggtaccactcagcagcatcaaacagttgtttcagatcttcagcatccaaaagcggtggcc
tgctgccgggggactgggaacacagcggtgatagagcatctaatcgatgacactcatcca
ccagagaagcaccaacacacgaggctgagagtgtttaccaaagacttccatgtcctttat
cagacagacagtttcagtttgaccctaaagtccacagtctggctccacatgtcagtcgtg
gcgtttgacagagatggagatgtgctggtgatcgactctaatcaggggatgatttggagt
ttgcggaagctccagagcgaccctgtcctaactcctcttgtgggagaccaccttgtccgc
ccaggtgggcttgtgtcactcagcaatatgctcatcattctggacagtggagaccacacg
gtgaagagttatacttctaaatctgaaagtggacccatgaaatag
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