Scomber scombrus (Atlantic mackerel): 133983820
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Entry
133983820 CDS
T10651
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133983820 (irx2a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133983820 (irx2a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
133983820
NCBI-ProteinID:
XP_062279007
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All DBs
Position
7:11878321..11881954
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AA seq
515 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPAYGASALAAPRNEDLARSSSGSAFSPYPGSAAFSASAGA
GFSSPLSYSTDPTTGFPSYMSSPYDAHTTGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEDDGDGERKEVERSDKTLDNSEASAEDEGISLHVDTLTDHSCSAESDGEKVSC
RVGELGSDQGGDKCDDEDGEDQNQTLNHNPPRFQLSPKPVTSSPLTGVEAPVLSHHQHHH
HHHLHHLHHIHNQREDLARSLVSSNNINTNKSSSCLDSRPPSGAPPNPTVKPKLWSLAEI
ATSDQKQQHQQQQLGQTGQPNCPSSSGGLLTPPTSSTTSPAASSPSLYPTPSILGRPIYY
TSPFYSNYTNYGNFSPLQGQGILRYTNSSGVSLAAAAAAAVAAANEGLSSLEASTNPKHR
PDSPLVKHNPNQIVIVEQQQQQHFRSANLEGKKGT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctttggctctttattcgtgt
ccggcttacggggcctcggctctggctgccccgcggaatgaagacttggcgaggtcgtcc
tctggctcagccttcagcccttaccctggatcggctgctttctccgcctcggctggtgca
ggcttctccagtccactgtcatactccacggatccaaccacgggattcccatcttacatg
agctctccatatgacgcgcacacgacgggcatggccggggcattaagttaccacccatat
gggagtccagggtacccctaccaactcaacgaccctgcgtaccgtaaaaacgccaccagg
gacgccacggccaccctgaaggcctggctgcaggagcacaggaagaacccctacccgacg
aaaggggagaagatcatgctggccattatcaccaagatgaccctgacgcaggtatccaca
tggttcgccaacgccaggaggaggctcaagaaggagaacaagatgacatgggcgcccagg
aataagagcgaagacgaggacgaggatgacggggacggggagaggaaagaggtggagcgc
tctgacaaaaccctggataacagcgaggcttcagcggaggatgaaggtatcagcttgcac
gtggacactctgacggaccactcgtgctcggcggagtctgacggggagaaggtgagctgt
cgcgtgggagagctgggctctgaccagggcggcgacaaatgcgacgacgaggacggcgag
gaccagaaccagaccctgaaccacaatccgccgcggttccagctctcacccaaacccgtc
acatcttcacctctaacgggggtcgaagcaccggttctcagtcatcaccaacaccatcac
caccaccacctccatcatctccaccatattcacaaccagcgcgaggatttggcccggagc
ctcgtcagtagcaacaatattaacaccaataaatcgtcttcatgccttgatagcagacct
ccttcgggggcgcctccaaaccctacagtcaagcccaaattgtggtcgcttgcggagatt
gctacctcagaccaaaagcagcagcatcagcaacagcaactggggcagactgggcaacca
aattgcccctcctccagcggtggcctccttactccccccacgtcctcaaccacctccccg
gctgccagttccccctccctctacccgaccccctccatccttggaagacctatttattac
acttctcccttttatagcaattacacaaactatggcaacttcagtcccctgcagggccaa
gggatcctgcggtacactaattcatctggagtgagtctggctgcagccgccgccgccgcc
gtcgctgctgcaaacgagggtctcagctctctggaggcgagcacaaaccccaaacacagg
ccagactctcccctcgttaaacataacccaaaccagattgttattgtcgagcagcagcaa
caacagcatttcagatccgcaaatttagagggaaagaaaggtacgtaa
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