Scomber scombrus (Atlantic mackerel): 133983928
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Entry
133983928 CDS
T10651
Name
(RefSeq) retinoic acid receptor beta-like
KO
K08528
retinoic acid receptor beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133983928
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssco03310
]
133983928
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133983928
Nuclear receptors [BR:
ssco03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
133983928
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133983928
NCBI-ProteinID:
XP_062279125
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Position
7:23086165..23101584
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AA seq
454 aa
AA seq
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MFDYMEFQAFGPGEILDLYVSSPAVCMLQEQEREQEQQDLAAYFPELIETDWQTHRCAQL
GSQSSSSSSDDLFTSPASPLPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKN
MVYTCHRDRNCIINKITRNRCQYCRLQRCFAVGMSKESVRNDRNRRKGKKEAVKMTIMET
YELTAELGLIVEKICRAHRDTFPSLCQLGKYTTNSSSDHRIQLDLGLWDKFSELATKCII
KVVEFAKRVPGFTGLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQI
HNAGFGPLTDHVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLE
ALKIYSRKRRPSMPLMFPKALMKITDLRSISAKGAERVVTLKMEIPGSMPPLIKEMLEDL
QNLDKNQRKDSEESRSEQNATVSSQYLNSSGFLL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggaatttcaagcttttggtcccggagaaatcctggatctgtatgtg
tccagccctgcagtgtgcatgctacaggagcaggaacgggaacaggagcagcaggatttg
gctgcatacttcccagagctgatcgagacggactggcaaactcaccgctgtgcacaattg
ggaagccagagctccagctccagctcagatgacctgttcaccagccccgcctcccctctg
ccccctcctcgcacttacaagccctgtttcgtctgtcaggacaaatcctccggctaccac
tatggagtcagtgcctgtgagggctgcaagggcttcttccgccgcagcgtgcagaaaaac
atggtgtacacctgccaccgggacagaaactgtatcatcaacaaaatcaccaggaaccgc
tgtcagtactgtcggctgcagaggtgcttcgccgtgggaatgtcaaaagagtctgtgaga
aatgacagaaacaggagaaaagggaaaaaggaagcggtgaagatgacgatcatggagacg
tacgagctgacggcggagctcggtctcatcgtggagaagatctgcagggcccacagagac
accttcccctccctgtgccagctgggaaaatacaccacaaactccagctcagaccacagg
atccagctggatctcggcttgtgggataagttcagcgagctcgccaccaagtgcatcatc
aaggtggtggagtttgccaagcgagtgcctggtttcaccggcctgaccatcgctgaccag
atcactctgctcaaagccgcctgcctggacatcctgatcttgaggatttgcactcgctac
actcctgaccaggacaccatgaccttctccgacgggttgaccctgacccgcactcagatc
cacaacgccggttttggaccgctgacagatcacgttttcacatttgcagggcagctgctg
ccactggagatggacgacacagagagcggcctgctcagcgccatctgcctcgtctctgga
gaccgtcaggatctggaggagccgtccaaggtggaggtgctgcaggagccgctgctggag
gcgctgaagatctactcccgcaagcgacggcccagcatgcccctcatgttccccaaagcc
ctcatgaagatcactgacctgcgcagcatcagtgctaaaggagcggagcgagtggtgacg
ctaaagatggagatcccaggctccatgcctcctctgatcaaggagatgctggaggatctg
cagaacctggacaaaaaccagaggaaagactcggaggagagtcgatcggagcaaaacgcc
accgtctcctcgcagtacctgaactcctccggcttcttgctctga
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