Scomber scombrus (Atlantic mackerel): 133984052
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Entry
133984052 CDS
T10651
Name
(RefSeq) polycomb protein SCMH1
KO
K11461
polycomb protein SCMH1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133984052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133984052
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
133984052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
133984052
NCBI-ProteinID:
XP_062279281
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Position
7:complement(21872164..21887210)
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AA seq
667 aa
AA seq
DB search
MKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEIQPIGNCEKNGG
MLQPPLGFRLNASSWPMFLLKTLNGAEMAPSRIFHKQEPPAPEQNSFQVGMKLEAVDRKN
PHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCALTGDNLQPPGTKVV
LPKSLGALTDGSVESPAMHSAPTVGRPPVQRGRKPGRRKTKVTVPWSQKGSALGPQSIQP
GKALEPIKIPKKRGPKPGSKLGWAKRTGWLEEAMAGPGRPVTGPGRPVTGPGRPRGRLPA
NWAQRIALQQAQTQAEPIKIPKKRGPKPGSKRKPRVVPNPVPTSPTSSTPEPDTSTVPLD
NATIPNSALQAPTVCVYLNKYGKVGPHLDQRRIQQLPDHFGPGRASSVLQQCVQACVDSA
HNQATVFSCLKSGQGGEVISAYFDQQHHTLTLPTVSSVTYVLRFLEKLCHNLHCDPLFGS
QPVARGGVHYDSHTYTTDRRSFGDNLTTGPGRGTKRFLQESYNSPLPQKLAKIPRHSNDG
ESFMENNVAASEHLKKSPLSPNCTGQTAGLRSPSKLLHHNNSTGSGSFRESPRPSGQDPN
LWTVEDVMQYIRDIDPVLAPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTFH
IDKLKRA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggaggcccaggatccacgaaacaccacgtccacctgcatcgcaacagtggtt
ggcttgacaggctcacggctgcgcttacgcttagatgggtctgacaacaagaatgacttc
tggcgcttggtggactcctcagagatccagcctattggcaactgtgagaagaatggaggc
atgctgcagccaccactcggttttcgtctcaatgcgtcctcttggccaatgttccttttg
aaaacacttaatggagctgagatggcaccgtctcgcatatttcacaagcaggagcctcca
gccccagagcagaattccttccaggtgggcatgaagctggaagcggtggaccgtaaaaat
ccccacttcatctgcccggccacagtgggtgcactgcgtggagtcgaggtgctggtcacc
tttgatggctggagaggagcttttgactactactgccgctatgactcgcgtgacatcttc
cctgttggctggtgcgccctcactggagacaacctgcagccgcctgggaccaaagtagtg
ttgcctaagagccttggagcattgacagacggtagtgtggagagcccagccatgcactct
gcccccacggtgggcaggcctccggttcagagaggacgtaagcctggccgcaggaaaacc
aaggtgacggtgccctggagtcagaagggatcagcgttgggaccacagagcatccagcca
ggcaaagctctggagcccatcaagatccccaagaaacgtgggcccaagcctggcagtaag
ctgggctgggcaaagagaactggctggctggaagaagccatggctggcccaggacggcca
gtgacaggcccagggcggccagtgacaggcccagggcgacccagaggcagactgcctgcc
aactgggcacagaggatagctttgcagcaggctcagactcaggcagaacctattaagatc
cctaagaaaagagggcccaagcctggcagcaagagaaaaccacgcgtggtacctaatccc
gtccccacgtctcccaccagcagcaccccagagcccgacaccagcactgtgcctctggac
aacgccaccatcccaaactcagcactacaggctcccacagtttgtgtgtacctaaacaag
tacggcaaggtggggccccatttggaccaacggcgaatccagcagctcccggaccacttt
gggccaggccgggcctcttcggtgcttcagcagtgcgtccaggcgtgtgtggactctgcc
cacaaccaggccacagtcttctcctgcctcaagtctggccaaggcggtgaagtcatttca
gcttactttgaccagcagcatcacaccttgaccctgcccacagtcagtagtgtcacctac
gtcctccgcttcctggaaaaactctgccacaaccttcactgcgatcctctgtttggcagc
cagcctgtcgccagaggtggcgtgcactacgacagtcacacgtacactacagatagaaga
agttttggagataacctgacgacaggcccgggccgaggcactaagcggttcctccaggag
tcctataacagtcccctgcctcagaaactggccaaaatcccccgacactccaatgatgga
gagtccttcatggagaacaacgttgctgcatcagagcacttaaagaagagccctctatcc
ccaaactgcacaggccaaacagctgggctaaggtctccctccaagctgctgcatcataac
aactccacaggttcgggcagttttcgggagagccccaggcccagtggtcaggaccccaac
ctgtggacagtagaggatgtcatgcagtatatcagagacatcgacccagtgctggcacca
catgctgaccttttcagaaaacatgagattgatgggaaagcactcctcttgctgcgtagc
gacatgatgatgaaatacatgggcttgaagctcggtccagcccttaaactcacctttcac
atcgacaagctcaaacgggcctga
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