Scomber scombrus (Atlantic mackerel): 133984109
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Entry
133984109 CDS
T10651
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04510
Focal adhesion
ssco04512
ECM-receptor interaction
ssco04810
Regulation of actin cytoskeleton
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133984109 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133984109 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133984109 (itga10)
04810 Regulation of actin cytoskeleton
133984109 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133984109 (itga10)
Cell adhesion molecules [BR:
ssco04515
]
Integrins
Integrin alpha subunits
133984109 (itga10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
vWA_SIBA-E
ITGAX-like_Ig_3
EIF3I
Motif
Other DBs
NCBI-GeneID:
133984109
NCBI-ProteinID:
XP_062279362
LinkDB
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Position
7:complement(18296492..18321125)
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AA seq
1171 aa
AA seq
DB search
MELRKYLLCLEFILFLKGLCQCFNIDVKHPRIFTGPEDALFGFSVLQHESDGEKSMLVGA
PWDGPPNNRKGDVYKCVVGEEKNSNCIKVNLGESALQNVSKNLRNSHLGMTLTPDSPDGF
LACAPLWSQECGTSMFSTGICASVSDDLEPRKTIAPTAQRCSTYMDIIIVLDGSNSIYPW
YEVQNFLSNILSKFHISSDQMQVGILQYGEVAVHEWSLKDYQTTQEVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSAERGAREGATKVMIVVTDGESHDGEELPDALVECTSRNITRYA
IAVLGHYIRRQQDPETFIKEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNESTFHMEMSQIGFSTHKLDDGILFGMVGAYDWDGGVLKEGTNGRIMPPREAFESEFP
LELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSNDGDVNIVQALNGEQ
IGSYYGSEVCGLDIDQDGITDVLLVAAPMYLGSGNKEAGRVYIYTLSGEEVFVSNGTLKS
EEKSQDARFGYALAAAPDLNHDGFTDLLVGAPLEDEHRGAIYVYHGDGIYINHNFKQRIP
GSLISSSLQYFGRSLSARLDLDGDELIDLAVGAQGSAVLLSSRSIVQINVSLSFQPHSIN
VIQKTCQRGGRDSACLNATACFTAVSRSPGPRSNSFELWVSAMLDDRKLSARALFDDSSH
RQTQLAVRVHTGQTVCYKLPFHVYDTADYIRPISFSLRFKINNTESGPMLDEGWPTTVKK
YISFFKDCGEDDVCTTDLVLQADMNIFGTRQKPYVIRSPRRRLAVEMQLDNRLENAYNTS
LTLHYSRNLHFSSLSIREDAHFKIECTALGTNSHLCNVSYPVFRSQSKVNFTLEFEFSCT
SLHNRVQMKLIAASDSVEREETLGDNNVQLQSFVQYEPDLFVSSDSNLNRYEVHPTRTVS
EAIGPEFYTHLRLQNLGCYSVSNLELRLLLPSVAAGDRVFMTVTDVFSYNATGVNCSMLS
DLAQLKARQRDVRPLHPEDMMQNDILNCSRSWCTEVVCEVQQLLKGQTAIIRVSRRVHDD
FFRKAKYKSARIIGVHHLAAQETNLITLGTGTVWRETVLEVLKGRAIPISLWILIGSIIG
GLLLLALIIFILWKLGFFTRKQRGEDENHED
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtaaatacctgttgtgcctggagttcatcctctttcttaaagggttgtgt
cagtgtttcaacatagatgtaaagcatccacgcattttcactggtccagaggatgctctg
tttggcttctctgttttacagcatgaatcagatggagagaaatcaatgctggtcggtgct
ccctgggacgggccgcccaacaacaggaaaggagatgtgtacaaatgtgttgtgggggag
gagaagaactcaaattgcatcaaagtgaatctaggtgaatctgctctccagaacgtatct
aaaaacctgaggaattctcacctgggaatgactctcacgccagactcacctgatggcttc
ctggcatgtgcccctctgtggtcccaagagtgcggtacgtctatgttcagcaccggcatc
tgtgcctccgtcagtgatgatctagaaccaagaaagaccatcgctccaacagcacaaaga
tgctccacatacatggacatcataatcgtactggatggctccaacagtatctacccctgg
tatgaggtccagaacttcctcagcaacattctcagcaagttccacatcagctcagaccag
atgcaggttggtatactgcagtatggcgaggtagcagtccacgagtggtccctgaaagac
taccagaccacacaggaggtggtcgaggccgccaagaacatcagccggcaggagggacga
gagacgcgcactgcatatgccatccaaatggcctgcacggaggcattcagtgctgagcgt
ggggcgagagagggcgccaccaaggtgatgatcgtagtgacagacggagagtcacatgac
ggggaggagctaccagacgctctggtggaatgcacgagcagaaacatcaccagatacgct
attgctgttctgggtcattacatccgtcggcagcaggaccctgagacgttcattaaagag
ataaagtatattgccagtgaccctgacgacaaatactttttcaatgtgaccgatgaagca
gcgctcaatgacatcgtggatgccctgggagaccgcatcttcactcttgaaggcacgctg
ggctacaacgaaagcactttccacatggagatgtctcagattggcttctccacgcacaaa
ctggatgatggcattctgtttgggatggtgggtgcctatgactgggatggtggagtgctg
aaggaggggaccaacggacgtatcatgccacccagagaggctttcgagagcgagttccca
ctggagctcaaaaatcacgctgcttatctcggttacacagtgtcatctgtgatagttggt
gactggaggaggctgtatgtagccggggctcctcggttcaagcacaaaggcaaagtcatc
ctgtttgaactcagtaatgacggcgatgtcaacattgtacaggccctcaatggggaacag
attggatcttattatggcagcgaggtgtgtgggttggatattgaccaggatggcatcact
gatgtccttctggttgcagctccaatgtacctcggctcaggaaacaaggaggccggtaga
gtctacatctacactctcagcggagaggaggtgtttgtatctaacggtactctgaagtca
gaggaaaagtctcaggacgccaggtttggttatgcactggcagccgctccagacctcaac
cacgatggcttcacagacctgctagtaggggccccactggaggacgaacacagaggggca
atctatgtctaccacggtgatggtatttacatcaaccataattttaaacagcgtattccg
gggtcattgatttcctcctccctgcagtattttggccgcagtctgagtgctcggttggac
ttggatggagatgagctaatagacttggcggtgggagcacaaggcagcgctgtactgctc
agctctcgaagcatagtccagatcaatgtgagtctgtccttccagccgcactccatcaat
gtcattcaaaaaacctgccagaggggaggcagagactcagcgtgtctcaatgccaccgcc
tgcttcacagccgtctcccgctcccccggaccacgcagcaacagctttgagctgtgggtg
tcggccatgttggatgacaggaagctgtctgcacgggccctgtttgatgacagctcccac
cgacagactcagctggcagtgcgagtgcacacaggacagactgtctgttacaaactgccc
ttccacgtctatgacacagcagattacatccgtccaattagcttctcactgaggtttaag
atcaacaacacagagagtggtccgatgttggatgagggctggccaaccactgtcaagaaa
tatatctcattctttaaagactgtggtgaggatgacgtgtgcacaacagacctggtgctg
caggctgatatgaacatctttggcacaagacagaagccttatgtgattcgcagccctcgt
aggcgtctggcggtggagatgcagcttgacaacagactggaaaacgcctacaacaccagc
ctgacgctgcactattcacgcaacttgcacttctccagcctcagcatcagggaggatgcc
cactttaagattgagtgtacagcacttggcaccaacagccacttgtgtaatgtcagctat
ccagtgtttcgctcccagtcaaaggtgaacttcacgttggagtttgagttcagctgcaca
tctctgcataatcgagtccagatgaagctcattgctgccagtgacagtgtggagagagag
gagactttaggggacaacaatgttcagctgcagagttttgttcagtatgaaccagaccta
tttgttagcagtgactctaatttgaaccgatatgaggttcaccccactcggacagtgtca
gaagcaattggaccagagttctacactcacctcaggctgcagaatctcggctgttactct
gtgagtaatctggagctgaggctacttctgccctctgtggctgcaggagaccgagtcttc
atgactgtcactgatgtcttttcatacaacgctacaggagtgaactgtagcatgctgagt
gatctggcccagctgaaggccagacagagagacgtgcgacccctccaccctgaagacatg
atgcagaatgacatactgaactgtagcaggtcgtggtgtacagaggttgtgtgtgaagtc
cagcaacttctgaaaggccagactgcaatcattcgtgtcagccgcagagttcacgatgat
tttttcagaaaagccaaatacaagtcggcaaggataataggtgtccatcacctcgcagct
caggagactaacctcatcactctgggcacaggaacagtctggagagagactgtactggag
gtgctgaagggccgagcaattcccatctcactgtggattttgattggtagcatcattgga
ggtttgctgctattggcgcttatcatcttcatactatggaagcttgggttcttcacacgc
aaacaaagaggagaggatgagaaccatgaggactga
DBGET
integrated database retrieval system
