Scomber scombrus (Atlantic mackerel): 133984123
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Entry
133984123 CDS
T10651
Symbol
rnf115a
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133984123 (rnf115a)
04121 Ubiquitin system [BR:
ssco04121
]
133984123 (rnf115a)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133984123 (rnf115a)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133984123 (rnf115a)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133984123 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Zn_ribbon_19
zf-Nse
zf-ANAPC11
C1_2
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
133984123
NCBI-ProteinID:
XP_062279384
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All DBs
Position
7:complement(18279765..18288160)
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AA seq
341 aa
AA seq
DB search
MSGRRRTAVSGLWRTDVSVCAGVQGKMAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCD
SGFIEEVTEDSSLLEGGANGIDDTATQFAELWHLLLLERPFTIDSDNPDSDSQLPRGRLG
GLSDLGGLGGGPIGGSVPAGLGGPIGGLLGAGEHWGPGRPPRLHSQRRYRSRGSTRPDRS
PAVEGIVQQFLAGLFANSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENT
GPPPAEKERISSLPTVNISQEQADCCMECPVCKEDFVVGEPVRQLPCNHFFHSDCIIPWL
EMHDTCPVCRKSLNGEDSSSQPPSESPTLSMDPRTQERWSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccggaggcggacagctgtctccggtttgtggaggaccgacgtcagtgtttgt
gctggtgttcaggggaagatggcggaggctgcggctgttcccccgcatcggtttttctgt
cattgttgtaagggagaagtaaaccccaaactcccggagtacatctgtccaagatgtgat
tcggggtttatagaggaagtaacagaagactctagtctcctagagggtggcgctaacggg
atagatgacacagccacacagtttgcagagctatggcacctgctgttactggagcggccg
tttacaatagacagcgacaaccctgactcagactcccagctccctagagggcgcctggga
ggtctcagtgacctcggagggttgggaggtggaccaatcgggggctcagtcccagcaggt
ctagggggacccatcgggggtctactaggagctggggaacactggggaccaggacgtccc
cctcgcctgcacagccagaggagataccggtccagaggcagcactaggcccgaccgctcg
cccgctgtcgaaggcattgtacaacagtttcttgccggtctcttcgctaattctggagtc
cccggctcacctcccctctcatggacgggaatgctgcattcaaacccaggggattacgcc
tgggggcagggagggttagacgcagtgataacacagttactaggtcagttggagaacaca
ggacctcctccagcagagaaagagaggatctcttctcttccaactgttaatatctctcag
gaacaagcagactgctgtatggaatgtccggtgtgcaaagaggactttgtggtgggagag
cctgtcagacagctaccctgtaaccacttctttcattcagactgtataataccatggctg
gaaatgcatgacacatgtccagtgtgtaggaagagtttgaatggagaagacagcagcagc
cagcccccgtcagagtcccccaccctctccatggaccctcgcacacaggagagatggtcc
ttctga
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integrated database retrieval system
