Scomber scombrus (Atlantic mackerel): 133984258
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Entry
133984258 CDS
T10651
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133984258 (tprb)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133984258
NCBI-ProteinID:
XP_062279422
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All DBs
Position
8:complement(23358695..23382525)
Genome browser
AA seq
2370 aa
AA seq
DB search
MAALLLQEFESSEISKLPKTIQNKLEKILTDQQYEIDSLKAQQEQIRVDSEQHFFEKVKQ
LAQCQDEFLSKTQQHLKLKEEFTKLEDELKGVREKNKEYENVQGRLSSEQTVLSKAKEEL
EGEKRELVRTLERRSLEVENLNDDLRQLNDKLVEVNTSKMALQMKLDELEAAEVNIKYKE
KRMEQEKELLNGQTSWLNEELKAKSEELLSLSRQKGNEILELKCNLENREDELTRLQDQV
ASLKTSNESLQKQNEDMISKLRESKEQQATMEEKFRNELNANIKLSNLYKGAAADSEAKS
EELSLAVEELHKLLKDAGEANKALEGKLQEMNGATDNTVAELKERIQGLEKELDNANDLL
SNSKLRGPVRTTSLITEEQMTTMSPTAAAVSKIKPGMKLTELYTAYVESQEQLQLERLEN
KRVNKYLDDIVQEVEGKAPILKRQRDEHERMQKSVASLSTKLEQAVTEVHRLQKDADEAN
KRSSVLERDNQRSDLQVSDMAQQVRVLLIELEEARGNHVIHEEEVSSADVSSTSEVISQH
LVTFRGVEELQKQNQRLLLALRDLSDAQEKEEHEATGNKRGELEQSLDKAQVELESLKEQ
RNQQIKMTESIVRQRDMYRVLLAQATGVSFPQQGTPPEEFSLTSTPRRSPAATPTTGTPT
ALVSMAAESAEALEAKAALRQLQEVFTAYKKERVESDKGLTGQNEKLQEQLSDLRSQNAK
TSTQLEFASKRYEMLQDNVEGYRKEIASLREKGQKMAAATQKHEQTIHTSNEDLRAAKEK
LAMAEGRAESLRKERDMLKLVESRLNQEKETILSQQQSQNLLLSNLQTIQATLERSETDT
RQRLNGQLEKQEREISQLQKRLENEVEQRHLLSRNQEIQLMDAKRQLETQVALQQKTKEL
LSAAELELNTHRLQQGSSEARHTLNAPSTPIIRGLQASDQDREDLQGRLRLAESRAEELA
ESLRAATSSMEQYRAMAQSLEESLDKEKQVTEQARSSIETRMKEAVEQHRRLQEKLLDAE
KEKQAIEDLKQRALVSLEEQINTLRRSLSSAQADRQAALLRVTVAETQQQQALQDSQDQA
KLAAETQDKYEREMMLHAADVEALQAAKAQALQAVELRHQLDERTQRVQAELLEARVSWG
EQEKILKEEMSKIENRHDELQTQNTLLHEQLQTMSSKMADNLQRASSESPMNISLTEEGK
SQDQVLEILRFVRREKEIAESRFEVAQGESLRYRLRVEHLERELKEVQDSLSAARERMQV
TAKTLAQHDELMKKTETMSILMETNKMLREERDKMEQELQQTQAKVQKMESDIMPLQQAN
SELSEKSGMLQAEKKILEEEIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEAHLKRIQQL
TEESNRLKADVTRTNNLTTSLQSQIQNLRDNMSKITDERNSLKKELDAKNQELQEKVRTI
TQVKKIGRRYKTQYDELKVEHDKMVAEAAAGPSQEEEARQASVQELQSLKDSLSQAESKT
KELEGQLENINKVVTERETEARNAQEQSSRLQTELTRLRQELQDKASQEDTLRQQMTDKE
EKTRKAIVYAKQKINQLMATKEQLQKENEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLRGQQERQEQRDEPAEAGPSKTQEQQRSTEQRQISLKTTPAADRGSASSSEPPTANIK
PTPVVATASKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAMQSTEG
PPVEHVTVYGSASGSVRSASPNIQTTLASPMLNVQQTQTQATAFVQPTQQQSVTHTEPAN
QEPPPVVIEATPSSQVEWPSTSSTSSVFGTVSATPGTSSMSKRPREEEESTTMVTDTEAS
QEDTSRAPIPKKLRIIQRVGPEEEVLAEDSVEAEGMVPTDSQDGAEASQTEEFQVLEDGD
EGTASQSVSMDQEVSLTQSETPDQHQREVIIIVTDTESEEDQEEEEEEEEEQDYEDEEEE
EDEEEEEEEEDEEDEEEDDGGMGEEGEDSNEGSGDGNEAYEGDDTEGADVTDPGTETEES
LGASDSTQRPADSQTPSFESSAMEVFSTEQPITSSGTRMPQSPRRPTHQLPARLNTLPAP
TSELGPPAQVQCIPVRRVPQLAPGMSSSAQHFFDDDDRMVPNAPTLVVPHRSDGFDQAMH
SPQVAGVPRFRFGASEDMPQTSSSSHSDLGQLASQGGLGMFESPLFLASHEEESGGRSVP
TTPLQVSAPVTIFSEVVQSDATEHTSQSVPMVSTSTPSLVVAGAAGSGEERDDVFLEPDT
DRPSSEASADPVVSQGDMEESSQPSDKSNLPSTSQEPSSSSADTSSAPPKPSRPGSSRQL
QRWPESRGGRMKRGGQAFPSRGIHGRRFAR
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaggagtttgaaagctccgagatatcaaagctacccaaaaca
attcagaacaaactcgagaagatcctgacagatcagcaatatgaaatcgattctttgaaa
gcacaacaagaacaaattagagtcgacagcgaacaacacttctttgagaaagtgaaacag
cttgctcagtgtcaggacgagtttttatccaagactcaacagcaccttaaactcaaagaa
gagttcaccaagctcgaggatgaactcaaaggtgtgcgtgagaaaaacaaggaatatgaa
aatgtccaagggaggttatcatcagagcagacggtgctgtcaaaagccaaagaagaactg
gagggagaaaagcgagaacttgtacgaacactggaaaggagatccttggaagtggaaaat
ttaaatgatgacttgaggcaactcaatgataagttggtggaagtcaacacctctaaaatg
gctctgcagatgaagctggatgagcttgaagcagctgaagtcaacattaaatacaaggag
aaacgtatggaacaagagaaggagctgctgaatggccaaacatcttggctaaatgaggag
ttgaaggccaagagtgaggagctattgtccctgtcccgacagaagggtaacgagatcctg
gaactgaagtgcaacctggagaacagagaagatgagttgacaagactccaagaccaagtg
gccagtttgaagacttcaaatgagagccttcagaaacagaatgaggacatgatcagcaaa
ctgagagaatccaaggagcagcaagccaccatggaggaaaagttcagaaatgagctgaat
gccaacatcaagctttccaatttatacaagggagcagcagcagattctgaggcaaaaagt
gaagaactgagtctagcagtggaggagctgcataagctgttgaaagatgctggagaagca
aacaaggcccttgaggggaagttgcaggagatgaatggtgccacagacaacactgttgct
gagctgaaggagaggatccaggggctcgagaaagaactggacaacgccaatgacctgctg
tctaattctaaacttagaggccctgtccgcacaacatctttgatcacagaggagcaaatg
acaactatgtctccaacagcagctgctgtatccaagataaaacctggaatgaagctaact
gagttgtatactgcctatgtggagagccaagagcagctgcagttggagcgcctggagaac
aagcgggtcaacaagtacctggatgatatcgtgcaggaagtggaaggcaaagcccccatc
ctcaaacggcagagagacgaacatgagcgcatgcagaagtcagtcgccagtctttccacc
aagctggagcaggctgtgacggaggtgcaccgcctgcagaaggatgctgatgaagccaac
aagcgctcctctgtcctggagagggacaaccagaggtctgatctgcaggtctcagacatg
gctcagcaggtgcgtgtgctccttatcgagctggaagaggcccgtggaaaccatgtgatt
catgaggaggaggttagctcagccgatgtcagcagcacatctgaggtgatcagtcaacac
ctggtgacgttccgcggtgtggaagagctgcagaagcagaaccagcgtcttctgttggcc
ctcagggacctcagcgatgcccaagagaaagaagagcacgaggccaccggcaataagcgt
ggtgagctggagcaaagtttggacaaagcccaggttgagctggagtccctgaaggagcaa
cgcaaccagcagataaagatgacggagtccattgtgaggcagagggacatgtaccgtgtg
ttgctggcccaggcaacaggagtcagtttccctcagcaaggtacaccacctgaggagttc
tccctgacttccaccccacgacgttcacccgcagccactcccaccacaggaacacccact
gcactcgtctccatggcagcagaatctgctgaagcactggaggccaaggcagctttgcga
cagttgcaggaggtgttcactgcctataagaaggagcgtgtggagtctgacaagggactg
actgggcaaaatgagaagctccaggagcagctttctgacctccgctcccaaaatgcaaag
acatccacacagctcgagtttgcttctaagaggtacgagatgctgcaggacaatgtcgag
ggctacaggaaagagattgcctccctcagagaaaaaggacagaagatggccgctgccaca
cagaagcacgagcaaaccatccacacttcaaatgaagatctgagagctgcaaaagagaag
ctcgctatggccgagggccgtgctgagagcctacgaaaggagagagacatgctgaagctg
gttgagtccaggttaaatcaggaaaaagagacaatcctaagccaacagcagagccagaac
ctgctgctttccaacctgcagaccattcaggccactcttgagcgctcagagactgataca
cgtcagcgcctcaacggccagctggagaaacaggaacgagagatctcccagctgcagaag
aggctggagaacgaggtcgaacagcggcacctgctcagcagaaaccaggaaatccagtta
atggatgcaaagaggcagctggaaacacaggtggctttacaacagaagaccaaggagctg
ctgagtgctgccgagttggagctcaacacacacagactgcagcaaggcagcagcgaagca
cgccacacactgaacgccccctccacgcccatcatcagaggcttgcaggcttcagatcaa
gacagagaggatctgcagggccgcctgcgcttggctgaaagccgagcagaggagctggca
gagagtctcagggcagccacctccagcatggagcagtacagagccatggctcagagcctg
gaggagtccctggataaagagaaacaggtaacggagcaggcacgctcgtccattgaaacc
cgtatgaaggaggctgtagagcagcaccgcaggctgcaggagaagcttcttgatgcagag
aaagagaaacaagctatagaggacctaaagcagagagccctggtctctctggaggagcag
ataaacactttgaggaggagtctaagcagtgcccaggcagatcgccaggcggcactattg
cgagtgacagtcgctgaaacccagcagcagcaggctctacaagacagccaggatcaggct
aagctggcagctgagacacaagataaatatgagcgggagatgatgcttcatgcagcagat
gtggaggccctgcaggctgcgaaggctcaggccctccaagccgtggagctcagacaccaa
ctggacgagcgaacccagagggtccaagctgagctactggaggccagggtctcctggggg
gagcaggagaagatcctcaaggaggagatgtccaagatagagaaccgccatgacgagttg
cagacacagaacactctcctgcacgagcagctccaaacaatgagtagcaagatggctgac
aatttacagcgtgcttcaagtgagagtcccatgaacatctccctgactgaagagggcaaa
tctcaagaccaagtccttgagattctcaggtttgtgcgtcgggaaaaagagattgcagag
tctcgttttgaggttgcccaaggggagagtttgcgttaccgtctgagagtggagcacctg
gaacgagaactgaaggaggtgcaggacagcttgagtgctgcaagggagaggatgcaggtg
acagcaaagaccttagctcagcacgatgagctgatgaagaagacggaaactatgagcatc
ctgatggagaccaacaagatgctgagagaggagagggacaagatggagcaagagctgcag
caaacccaagctaaggtgcaaaagatggagtcagacatcatgccactgcaacaggcgaac
tccgagctgagtgagaagagcgggatgctgcaagcagaaaagaagatactggaagaagag
atcaagcgctggaaggctcggacccagcatttggtgagccagcagaaagattcagatcct
gaagagtacaagcgtcttcattcggagaaggaggctcaccttaaacgtattcagcagctc
actgaggagagcaacagacttaaagcagacgtgaccaggaccaataatctaaccacatcc
ctgcaaagccagatacagaacttgcgtgacaacatgagtaagataactgatgagaggaat
tcgctaaagaaggaactggatgccaagaaccaggagctccaggagaaggtgcggacgatc
acccaggtcaagaagattggacgccgctacaagactcagtatgatgagctcaaagtggaa
catgacaagatggtagctgaggccgcggcaggtccatctcaagaagaggaggctcgtcaa
gcctcagttcaggaactacagagcctcaaagattctcttagccaggctgaatccaagacc
aaagagctggagggacagctggagaacattaacaaggtggttacagagcgtgagactgaa
gcgcgcaacgcccaggaacagtcatccaggttgcagacagagctgaccaggctgaggcag
gagctgcaggataaggcttcccaggaggacacactgagacagcagatgaccgacaaggag
gaaaagaccaggaaggccatcgtttatgccaagcagaagatcaaccagctcatggccacc
aaagagcagttgcagaaggaaaatgaggagctaaagcagcagcgtgaggagttggaggtg
cgagtgagtgctctcaagtcccagtacgagggccgtctgagtcgacaggagagagaactg
agagacctgcgaggtcaacaggagagacaggagcaaagagacgagccagctgaggcaggt
cctagtaagacccaggagcagcagaggagcacagaacagagacagatcagtctgaagaca
accccagctgcagataggggcagtgctagcagctccgaacctccaactgccaacattaag
ccaacacctgtagtggccacagccagcaagcaacccgtcaacccggggaacaaaccaact
ccaagggcaagcatcaggcccatgatcaccccagctactgtacccaccccgacacccact
gctactgtcatgcccaccacacaggtggagacccaggaagccatgcagtctacagaaggc
ccaccagtggagcatgtgactgtgtacggtagcgccagtggatcggtgcgctccgccagc
cccaacatccagaccactttagcgagccccatgctaaatgtgcagcagacccagacacag
gccacagcttttgtccagccaacgcagcaacagagtgtgacccacacagagccggccaat
caggagccaccacctgtcgtaatcgaggcgacccccagctcgcaggtggaatggccttca
acatcttctacttcctctgtgtttgggactgtttcagcgacaccaggaacctcatccatg
tccaaaagacctcgtgaagaggaggaaagcaccaccatggtcactgacacagaggcctcc
caggaggatacctccagggctcctatacccaagaagttgcgcattatccagagagtgggt
ccagaggaggaggtgctggctgaggacagtgttgaggctgaaggaatggtgccaacagac
agtcaggacggtgcagaagccagccagacggaggagtttcaagtactggaggacggagat
gagggcacagcttcccagtctgtttcaatggaccaagaggtttctctgacacaaagtgaa
acccctgaccagcatcagcgggaagttatcatcatcgtaacagatacagagagtgaggag
gaccaggaagaggaggaggaagaggaggaagaacaggactacgaagatgaggaggaagag
gaagacgaggaggaagaagaagaggaggaagatgaagaagacgaggaggaagatgatgga
gggatgggggaagaaggggaggacagtaacgaagggagcggggatggaaatgaggcgtac
gaaggagacgacacagagggagctgatgtaacagaccctggcacagagacagaagagagt
ttgggggcgtctgactccacccagaggcccgcagattcccagacacccagctttgagagc
agtgcgatggaggtcttttctacagagcaacccatcacgagctctggtacacgcatgccc
cagtcgccacggagaccaacacatcagctgcccgcccgactgaacacgctgcccgcccca
acatcagaactaggacctcctgctcaagttcagtgtattcctgttcgtcgagtcccgcag
cttgctcctgggatgtccagcagtgctcagcacttctttgatgatgatgacaggatggtt
cccaacgctcccactctggtggtgccacaccgctctgatggttttgaccaggccatgcat
tctccacaagtggccggtgtccctcgcttccggtttggcgcttcagaggacatgccacag
accagctcgtcctcgcactctgacctgggacagcttgcatcacaaggaggtcttggcatg
tttgaaagccccctgttcctcgcatctcatgaagaggagtctggtggacgcagcgttccc
accacacctctccaagtgtcagcgccagtaaccatcttctcagaggtggttcagtcagac
gccacggagcacacctcccagtcagttcccatggtgagcacatcgacaccgagcctggtc
gtggcaggagcagccggttcaggggaggaaagagatgatgtcttcctggagccagacact
gataggcccagttcagaagcgtcagcggatcctgtggtgtctcagggggatatggaggag
tcaagccagccgtctgacaagtctaacctcccctccaccagccaggagccctcttccagc
tctgcagatacgagcagtgctccacccaaaccctccagacctggatccagcagacagctg
cagcgctggccagagagccgcggtgggcgcatgaagagaggaggtcaagcatttccctct
cggggtatacatgggagacgatttgccagatga
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integrated database retrieval system
