Scomber scombrus (Atlantic mackerel): 133984300
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Entry
133984300 CDS
T10651
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ssco01100
Metabolic pathways
Module
ssco_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
ssco_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
133984300
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133984300
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
133984300
Glycosyltransferases [BR:
ssco01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
133984300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
RHH_10
Motif
Other DBs
NCBI-GeneID:
133984300
NCBI-ProteinID:
XP_062279494
LinkDB
All DBs
Position
8:complement(3303670..3304986)
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AA seq
396 aa
AA seq
DB search
MFMNFRRIHKCQCIQLLTTGLVLCMVMVCWEELDHHVVSHMRSYTYRYLVNSYDFVNSSF
SINSNHHNRDDGLNGGFANYPYLINHRGKCRGGAEDGENWDEVLLLLFIKSSPENFERRQ
AIRDTWGNESYVWHELGASVRVVFALGVHQDVGERFRVQKALLEEDRTYEDLIQQDFLDT
FHNLTTKLILQFHWGHHYCPKAHFLMTADDDIFVHMPNLVKYLQQLLSSQSGAKDLWVGH
VHKGAPPIRRKDSKYHVPYELYPWPAYPDYTAGAGYVVSGDVAAKIYHATVALNSSMYID
DVFMGICAKAMGVSPQEHVYFSGEGKAPYHQCIYEHMITSHGHAIDIRSLWQEATNPTVY
NHSRGFIGNLYCTAVRVMLLCLPYYQNTYPCIAAFT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgaatttccgtcgtatccacaagtgccagtgcatacagctgctgaccacaggc
ctggtgctgtgtatggtgatggtctgctgggaggagctggaccaccacgtcgtcagtcac
atgaggtcctacacgtaccgctacttggtcaacagttacgattttgtgaattcgtccttt
tccatcaactccaaccatcacaatagagatgatggtctaaatggtggatttgcaaactat
ccatatctcatcaaccaccgaggtaaatgtagaggtggtgctgaagatggagaaaactgg
gatgaagtccttctgctactgttcataaaatcatctccagagaactttgagcggcgccag
gccattagggatacgtggggcaacgagagctatgtttggcatgaactgggagcaagcgtg
agggtggtgttcgcccttggtgtacaccaggatgttggagagaggttcagggtgcagaaa
gcactactggaggaggaccggacctatgaagacctgatccaacaggactttttggacacc
ttccacaacctgactaccaaactgatactgcagttccactggggccaccactactgccct
aaggcgcacttcctcatgactgcggacgacgacatcttcgtccacatgccaaacttggtg
aagtacctgcagcagctcctgagtagccaatcaggggctaaagacctgtgggtggggcat
gtacacaagggagcccctccgattcgccgtaaagacagtaaataccacgttccttatgaa
ctatacccctggcccgcttacccagactacactgctggtgctgggtatgtggtctcgggg
gatgtggctgctaagatctaccatgcaactgtggcactgaactcctccatgtatatagac
gatgtcttcatggggatttgtgccaaagccatgggagtctctccccaggagcatgtatac
ttttcaggggagggtaaggctccgtaccaccaatgcatctatgaacacatgatcacatca
cacgggcatgccatagatattcgctctctatggcaggaagcaacaaaccctacagtatat
aaccactccagaggatttataggtaatctatactgcacggcagtgagagtgatgcttcta
tgtctgccgtattaccagaacacttatccctgtattgctgcttttacataa
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