Scomber scombrus (Atlantic mackerel): 133984316
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Entry
133984316 CDS
T10651
Symbol
sec16b
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133984316 (sec16b)
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
133984316 (sec16b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
133984316
NCBI-ProteinID:
XP_062279516
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Position
8:complement(5465162..5477437)
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AA seq
930 aa
AA seq
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MDHRGSHPWTQPGRHSHRSKEKEDYHRYSHQEKDQSYPPPDPRERDRHRAHSDARYKAHF
TSPPPRPEPYPYSPQQYPYSYGGPEYQRPQSRQGYDYPPHGHWDYRESYGYYDHDYYSGQ
QGRPDAGQWMPQDSWRTEHQERTYKQEHPGTSYTEEYRYDQGRDNSQHYVNDYEDHPSRE
NEEVSSYYLGTLESSKNSGLSSSSYELSQYINGAEHNGPGAQSETEHGAVHPMSAPLKYS
IPHAVVSFGPAGQLIRVTPGFSTQEKVSQLEIHSLEVILSETQEQQEMRNFPGPLTREDL
HKVDAIEFAHQRAGACMKDDNLHDKSSAALLWNLLILLCRQNGQKVGSDIAELLMQGSNS
DGSWESDTPTLIDFGEGTTAEAPPSKGDDLLTGNWTSFSSETSEKALQSYTKLLLAGRKK
EALESAMDNGLWGHALFLASKMDNRSYTTVLNRFTGQLTSSDPLQTIFQLLSGRIPSVAT
CYGNEKWGDWRPHLAVMLSNETGDLAIQQKAITTMGDTLVSKGLLHAAHVCYLTASVPFG
VFMQKAERLVLLGSSHRQSFEYFATNSAIQCTELYEYCQTLGGKCLSIPSFQVYKLLYAS
RLLDCGLASQAFHYCEVVGQAILRQTEPYFVLTEEVIKLADRLRHSEGQFSEAGVSGAEQ
EPDWLKQLRARHHSLQTGNYDYIETYQPPHDGRAVANEDRKMFSESDLDDPRCKDIQSPQ
PELLYYRGHEDQETPLHQLQERNEEMTALSYDIRGPHMPQANPPMPVTEVYTPTAPTMAG
SQDFSYHSTDSAGVGTALPHCPLSDLPSAAEGAGLSSVEGTVGGQMPEVDICHQGSVQQS
FPQGLEASEQTDPPKQTTKGGWFSGWFKSKSKDVPKESLENRSPPQTELPPTTGFYPPPP
PAVVSPDVFVSQPSSAGVNPFSRKAGQQLG
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggatcacagaggatctcacccttggacccagcctggtcgccactctcacagatcaaaa
gaaaaggaggactaccacaggtattctcaccaggaaaaggaccagagttacccaccacca
gatcccagagagagggacaggcaccgggctcattctgatgctcgctacaaagctcacttc
accagtcctcctcccagaccagagccatatccttacagccctcagcagtacccttatagc
tatggaggaccagaataccaaagaccccagtccaggcaagggtatgattatccaccccat
ggtcactgggactacagggagagctacggttattatgaccatgactactacagtggacag
caaggacgaccagatgctggccagtggatgccccaagactcctggagaacagaacaccag
gaaaggacatataagcaggaacatccagggacctcctacactgaggagtacaggtatgac
caagggagagacaactcccagcattacgtcaatgactatgaggatcatccctccagagag
aacgaagaggtttcctcttattaccttgggacattagaaagttccaaaaactcagggtta
tcatccagcagctacgaactgagtcagtacataaatggagccgaacacaatggccctggt
gcacaatctgaaacagagcatggcgctgtgcatccgatgtcggctccactgaagtactca
atccctcatgcggttgtcagctttggacccgcaggccagctgatacgggtcactccaggc
ttttccacacaggagaaagtcagtcagctggaaatccacagtctggaagtcatcctgagt
gaaacgcaggaacagcaggagatgagaaacttccctgggcccttgactagggaggatttg
cacaaagtagatgctatagagtttgcccaccagagggcaggcgcgtgtatgaaagatgac
aatctgcatgataagagctctgctgccctcttgtggaatctactgatactgctgtgcaga
cagaatggacaaaaagttgggtcggatattgcagagctgcttatgcagggctcaaattca
gatggaagctgggagtcggatactcctacactcattgacttcggtgagggcacaactgct
gaagctccacccagcaaaggagatgacctgctcacaggaaactggaccagcttcagttct
gagacctctgagaaggccctgcagagctacacaaaactgctgctagctggaagaaaaaag
gaggccttggagtcggctatggacaacggcctctgggggcatgctctttttctggccagc
aaaatggacaacaggtcttacaccactgtgcttaacaggtttacaggccagctaacatcc
agtgatccccttcagaccatcttccagctgctgtccggtagaatcccctctgttgccacg
tgctacggaaatgaaaagtggggtgactggaggccccatctggctgttatgctgtccaat
gaaacgggtgatcttgccatccaacaaaaggccatcaccaccatgggggacacactagtt
tccaaaggtctcttacatgccgcccacgtctgctacctgacagccagcgttcccttcggg
gttttcatgcagaaggcagagagactggtgcttctgggtagcagccacaggcagtccttt
gaatactttgccacaaactctgctatccagtgcactgagttgtatgagtactgccagaca
cttgggggcaaatgcctttcgattccatcctttcaggtgtataagcttctgtatgccagt
cgacttctggattgtggacttgcatctcaagccttccattactgcgaggtggtaggacag
gcgatcctcagacagactgagccttactttgtcttgactgaagaggttattaagttggca
gacaggctgagacactctgaaggtcagttcagtgaagcaggagttagcggagctgagcag
gaacctgactggctgaaacaactgcgcgctaggcaccacagtttacagacagggaattat
gactatattgaaacataccagccacctcatgatggacgtgctgtggccaatgaggataga
aaaatgttctcagaatcggatctggatgatccaaggtgcaaggacatccagagtccacag
cctgaactgctttattacaggggccatgaggatcaagaaactcctctacatcaacttcaa
gaaagaaatgaggaaatgacagctttgtcatacgacatcagaggacctcatatgccacag
gccaatcctccaatgccggtaacggaggtttatactcccacagcgcccacaatggctgga
agccaagacttcagttatcatagcacagatagtgctggagttggaacagccttgccacat
tgtcctctgagtgatttgccatcagcagcagagggtgctggattgtcctctgtagaaggc
actgtggggggtcagatgcctgaggttgacatctgtcatcagggatcagtgcagcagagc
ttcccgcaaggtttagaggcctccgagcagaccgaccctcctaaacagaccaccaagggg
gggtggtttagtggttggttcaaatcaaaatccaaagatgtcccaaaggagagcttagag
aaccgaagcccgcctcagacagagctaccacctaccactggcttctaccctcctcccccg
cctgctgttgtttcccctgacgtgtttgtatcccagccctcctcagctggagtcaatccc
ttttcaaggaaagcagggcagcagctggggtag
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