Scomber scombrus (Atlantic mackerel): 133984325
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Entry
133984325 CDS
T10651
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133984325 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133984325 (tmco1)
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
133984325 (tmco1)
Transporters [BR:
ssco02000
]
Other transporters
Pores ion channels [TC:
1
]
133984325 (tmco1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF5683
DUF6809
DUF4199
Exonuc_VII_L
Vpu
Pox_LP_H2
DivIC
DSHCT
Nucleoside_tran
SLC52_ribofla_tr
Peptidase_S49_N
Myc_target_1
DLH
Piezo_TM1-24
DUF6080
Motif
Other DBs
NCBI-GeneID:
133984325
NCBI-ProteinID:
XP_062279530
LinkDB
All DBs
Position
8:5269282..5272912
Genome browser
AA seq
188 aa
AA seq
DB search
MSTMFADTILIVFISVCTALLAEGITWVLVYRTEKYKRLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT
PLSYIQGLSHRNLLGEDFTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGP
PPQAAKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaatgtttgccgacaccattctcatcgttttcatctctgtgtgcacagcgctg
ttagccgaaggcattacctgggtgttggtgtatcgcactgaaaagtacaagaggttaaag
gctgaggtagaaaaacaaagcaaaaaacttgagaagaaaaaggaaaccatcacagaatct
gcaggacgtcaacagaagaagaagatcgaaagacaagaagagaagctgaagaacaacaac
agagacctgtctatggtccgcatgaagtccatgtttgccatcggcttctgcttcacagct
ttgatgggcatgttcaactccatttttgatggaagagttgtggccaagttgccgttcacg
ccgctgtcttacatccagggactgtcgcatcgcaacctgctgggcgaggatttcaccgac
tgctcctttatcttcctctacatcctctgcaccatgtctatcagacagaacattcagaag
atgctcggtctcgcaccttccagagctgcaacaaaacaggctggaggcttcctgggacct
cctcctcaggcagctaagttctcttaa
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