Scomber scombrus (Atlantic mackerel): 133984327
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Entry
133984327 CDS
T10651
Symbol
cdh15
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133984327 (cdh15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133984327 (cdh15)
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Major cadherins
133984327 (cdh15)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
133984327
NCBI-ProteinID:
XP_062279535
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All DBs
Position
1:complement(23393496..23410839)
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AA seq
803 aa
AA seq
DB search
MAVRMLMACVLGTLLCQVWGSAETQDKEDKLRPQALYPWRNQGKGMVRVKRDWIIPPIRV
LENSKQVPEDLVQIKSDKIFTGEVIYKLEGPGVDQEPKNLFEIDDKSGVIRSKRPLDREK
DRSFTLKAFALSPSGERLENPTTIEIVVLDQNDNRPAFTQKQFNGAVSEFSVPGTSVMSV
SATDADDPMTENAHLSYSIISQESIPANTVTKTMFGINNETGAIYTRDVGLDREVVKSFR
LKLQVGDMGGMGLTRDGVAIIDVSDINNNAPQFSPASYSMTAVENLKEYEVGRVNVTDKD
DRGTGNWEAKYFISNDPHGNFAITTDPDTNQGVLMVVKPLDYETQKECTLILKVENINRL
DKAPNLPASTATVVVSVVNENEAPHFREDPIKIVVPESVVPGTILKRDIAYDPDNSELRY
EISRDPERWLDINRNTGDIIAKRTFNMRSPHVKNNIYNAVVKVTGQYADGLSTTATVVIT
LKETNDFPPQLFPLSGSVCRNAGRASSGLVLTAVDEDLPPHAAPFIFEMTDDASNNWTFI
HVNDTHSLLQPLLELETGEYAVTVLVSDSGSPVLSAYAQVNVTVCLCDSFGDCKSEAGAI
FGSSVGISFFALIIIMVCFALLLLLLLLAVAVTTCGRRHQIKKGSGLLVGDSEDDIRDNV
LNYDEQGGGEEDENAFNIDLLWNPLDAPSTPGSYCPMPGVPRGKQPLRRDAPHNLPSPTY
PRRPPADPTDIEDYINDGLEAADNDPNVPPYDTALIYDYEGEGSLAGSLSSIASSSSDGD
QDYDYLNDWGPRFQKLANMYDPR
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggatgttgatggcgtgtgtgctgggtactctgctatgtcaggtgtggggc
tctgcagaaacccaggacaaggaggacaagctgcgtcctcaggccctttacccatggaga
aatcaaggcaagggaatggtcagggtgaaaagggactggatcatccctccaatcagagtg
ctggagaatagcaagcaggttccagaagatctcgtccagatcaaatcagacaaaatcttc
acaggtgaggtgatctacaagttagaaggaccgggggtggaccaggagccaaagaatttg
tttgagatcgatgacaaatcaggagtaatcaggagcaagcggccactggacagagagaaa
gaccgtagcttcacgctgaaagcttttgcactgtccccaagtggagagagactagagaat
ccgaccaccatagagatagtcgtgctggatcagaatgacaacagacctgccttcacccag
aagcagttcaatggtgccgtctcggagttctctgtcccaggcacgtcagtgatgtcagtg
tcagccactgatgcagatgacccaatgaccgaaaatgctcatctgagctactctatcatc
agccaggagagcatccctgccaacactgttactaagactatgtttggtatcaacaacgag
actggagccatctacacaagagatgtaggcctggaccgagaggtggtgaaaagtttccga
ttaaaactgcaagttggtgatatggggggcatggggctaacaagagacggtgtggcaatc
atagatgtatctgacatcaacaataacgccccacagttcagccctgcttcgtacagtatg
acagcagtggagaacttgaaggaatatgaggttggtcgggtgaatgtgacggacaaagat
gatcgtggaacaggaaactgggaggccaaatacttcatttctaatgaccctcatggaaac
tttgctatcactacagatcctgacaccaaccagggtgttctgatggtggtgaagcctttg
gattatgaaacacagaaagagtgcaccctgattctgaaggtggaaaatatcaatcgtcta
gacaaggctccaaacctgccagcgagcactgctacagtggtggtgtctgttgtgaacgag
aatgaagctccacatttcagggaggaccccataaagatcgtggtccctgagtctgtggtt
cctggaacaattctcaaacgcgatattgcctacgaccctgataattctgagctgaggtat
gaaattagcagagatcctgagaggtggctggacatcaacagaaatactggagacattatc
gccaagagaacctttaacatgcgatctccacatgttaaaaacaatatctacaatgctgtg
gtcaaggttacaggtcagtatgctgatggtctatcaactacagccacagtagtcatcaca
ctgaaggagaccaatgacttcccacctcagcttttccctttgagtggctctgtatgcagg
aatgcaggccgggcgagttctggtctggttctgactgctgtggatgaagaccttcctcca
cacgctgcaccttttatctttgaaatgaccgatgacgcatcaaacaactggacttttatt
catgtcaacgatacacactcactgcttcagccgctcttagagctggagacaggagagtat
gcagtcacagtgttggtgtcggactctgggagtccagttctcagtgcttatgctcaggtc
aatgtcactgtgtgtctctgtgactccttcggcgattgtaaatctgaggcgggggcgatc
tttggctccagtgtgggaatcagcttctttgctctcatcatcatcatggtctgttttgcc
ctcctactgttgctgctcctcctggctgtggcggtgaccacttgtgggagacgccaccaa
atcaagaaaggatccggtctgcttgttggggattcagaggatgacatacgtgataatgtc
ctcaactatgatgagcaaggagggggtgaggaagatgagaatgccttcaacatcgacctg
ctgtggaatcccctggatgctccttcgaccccggggtcctactgtccaatgcctggtgtt
cctcgaggcaagcagcccctcaggagggatgccccccacaacctgccttccccaacctac
ccacggagacctcctgcagatcctactgacattgaggactacatcaatgatggcctggag
gccgcagacaacgatcctaacgtgcctccctatgacacagccctgatctatgactatgag
ggagagggctcactggcaggcagcctcagctccattgcttcaagcagctctgatggagac
caggactacgactacctcaatgactggggaccacgctttcagaaactggccaacatgtat
gatccacgttaa
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