Scomber scombrus (Atlantic mackerel): 133984330
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Entry
133984330 CDS
T10651
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133984330 (sox2)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133984330 (sox2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133984330
NCBI-ProteinID:
XP_062279534
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All DBs
Position
8:complement(27233839..27234804)
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AA seq
321 aa
AA seq
DB search
MYNMMETELKPPAQTNTGGTGNTNTSGTGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGGNGMGSGVGVGVGGGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQLS
YQHPGLNAHNPSQMQSMHRYDMSALQYNTMASSQSYMNGSPTYSMSYSQQTTPGMTALGS
MGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSEQSAQTRLHMS
GHYQSTVPGTTINGTLPLTHM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaacttaagccccctgcccagaccaacacggggggcacg
ggcaacaccaacacgtccggcaccggccccaaccagaaaaacagtccggagcgggtcaag
agacccatgaacgcgttcatggtgtggtcccggggccaaaggaggaagatggcgcaagaa
aatcccaaaatgcacaactcggagataagcaagagactgggcgccgagtggaaacttctg
tcggagagcgagaagagacctttcatcgacgaagccaagaggctccgggccctgcacatg
aaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaagaag
gacaagtacaccttacctggtgggctcctggctccgggaggcaacgggatgggaagcggg
gtcggtgtaggagtggggggcgggctgggcggtggggtgaaccagcggatggacagttat
gctgcgcacatgaacggctggaccaacgggggttacggcatgatgcaggaccagctgagc
taccagcacccgggactgaatgcccacaacccgagccagatgcaatccatgcaccgctac
gacatgagcgccctgcagtacaacaccatggccagctctcagagctacatgaacggctcc
ccgacctactccatgtcctattcccagcaaaccacgccggggatgaccgcgctgggctcc
atggggccctcctcggtggtgaagtccgagtccagcagctccagccctcctgtcgtcacc
tcgtcctctcaccgtgctgccccgggctgccaaagcggagatctgagggacatgatcagc
atgtacctgcctggggcggaggtgagcgagcagagcgcccagaccaggctacacatgtcc
gggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgcctttaacacac
atgtaa
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integrated database retrieval system
