Scomber scombrus (Atlantic mackerel): 133984331
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Entry
133984331 CDS
T10651
Symbol
slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
133984331 (slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133984331 (slc1a6)
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
133984331 (slc1a6)
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
133984331
NCBI-ProteinID:
XP_062279536
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Position
8:14657165..14661957
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AA seq
562 aa
AA seq
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MNEKPPTSASLFLNEDADKPPLPERGDLRRRLRRAMERRASSMKERMSSIRKDSVKGFLK
RNLFVLFTVAAVALGVILGFALRRHNLSMREIKYFAFPGELLMRMLQMLVLPLIVSSLVT
GISSLDSKASGKMGVRAVVYYMVTTLIAVFIGIVIVMIIRPGKGSRDSPVAKSGNIEPVQ
AADAFLDLIRNMFPPNLVEACFKQYKTVYKKIVHTRNVTVTVNLTESLNITDSSLNVNLT
RVLHTIQEKVEENIPISGSSAGVNALGLVVFSMCFGLVIGNMKQQGQALRDFFDCLNEAI
MRLVAIIIWYAPVGILFLIAGKIVEMKDIAQVGGQLGMYTVSVIVGLLIHGLFVLPLLYF
LVTKKNPYSYIGGLLQALITALGTSSSSATLPITFRCLEENNHVDKRVTRFVLPVGATIN
MDGTALYEAVAAIFIAQVNDMDLNFGQILTISITATAASIGAAGIPQAGLVTMVIVLTSV
GLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRGELQSQDDEVHNSVIEENE
KPYQLICQDNDTLNHRNSETTM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaagccccctaccagtgcaagtcttttcctgaacgaggacgcggacaaaccc
ccactgccggagcgaggagacttaaggaggcgactacgcagggccatggagaggagagcg
agcagcatgaaggagaggatgagctccatccgcaaggacagtgtcaaaggtttcctgaag
aggaacctgtttgttctgttcactgttgcagctgtggctcttggtgtaatcctcggcttc
gctttacgccgccacaacctgtccatgagggagatcaagtactttgcctttcctggggag
ctactaatgagaatgctgcagatgctggttctgcctctcatcgtctccagtctagtcaca
ggtatttcctccctggacagcaaggcgtcaggtaagatgggtgtgcgtgcagtggtctac
tacatggtgaccaccctgatcgctgtgttcatcggtattgtcatcgtgatgatcatccgc
ccagggaaaggcagcagggatagtcctgtggcaaaaagtggaaacatagaaccagttcag
gctgctgatgcttttctggatctcatcaggaacatgtttcctcccaatctggtagaggct
tgtttcaaacagtacaaaactgtctacaagaagattgtgcacacaagaaatgttacagtg
acagtgaacctcaccgaatctctcaacatcacagactctagcctgaatgtgaacctgacc
agggtgctgcacaccatacaggagaaagtggaggagaatatccctatatcgggctcctct
gctggagtgaatgccctcggactggtggtcttctccatgtgcttcggtctggtaattggc
aatatgaagcagcagggccaggccctcagggacttctttgactgcttgaatgaagcaatc
atgaggctggttgcaatcatcatctggtacgctccagtgggcatcctgttcctgattgca
gggaagattgtagagatgaaggatatagcacaggtgggtggccagctagggatgtacacc
gtgtcggtcattgttggtctcctcatccatggtctctttgtcctgccgctgctctacttc
ctggtgaccaagaagaacccctacagctacattggtgggctgctgcaggcgctcatcaca
gctctgggaacctcctccagctctgctaccctgcccatcaccttccggtgtctggaggag
aacaatcatgttgataaacgagtgacacgttttgtcctccctgtgggtgctaccatcaac
atggatggcacagccctctatgaagctgtggcagccatcttcattgctcaagtcaatgac
atggacctaaactttggccagattctaaccatcagtatcacggcaactgctgccagcatc
ggagcagcaggcatccctcaggctggcctggttaccatggtgattgtattgacatcggtg
ggactgcccacagaggacataacactgatcatcgctgtggattggttcttggaccgcctg
cgtaccaccaccaacgtgctgggcgactcactcggcgctggcattgtggagcacctttcc
cgtggagagttgcagagtcaggatgacgaggtgcacaactctgtaatcgaagagaatgag
aagccctaccagcttatctgccaggacaatgacacactgaaccaccgcaacagtgagacc
acaatgtga
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