Scomber scombrus (Atlantic mackerel): 133984346
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Entry
133984346 CDS
T10651
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133984346 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ssco03051
]
133984346 (psmd1)
Proteasome [BR:
ssco03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
133984346 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Cnd1
Zip
DUF809
SPATIAL
DUF4576
Motif
Other DBs
NCBI-GeneID:
133984346
NCBI-ProteinID:
XP_062279595
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All DBs
Position
8:18577274..18616249
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AA seq
961 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALQKLDFLVNDFWAEISGSVDKIEVLYEDETFRSREFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVTDDSEYVETIIAKCIDHYTKLRVENAELPE
DEEKKSIDPRLEGIVNKMFLRCLNDHKYKQAIGIALETRRLDMFEKTILESNDVSGLLAY
SLKVCMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPTPDKDSDAMET
DDKAGSSPAGKPADTKDEPKDQNAKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGAL
GLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRRSGMYTVGMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFILFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEVTCPKVNQFRQLYAKVIND
KHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFL
SLAFTPTAIICLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAKA
KKKEKEKKEKEEEKMEVEVQEGEKEKKDEEKEKEKKKEAEPNFQLLENPARVMPAQLKVL
TMPETCRYQPFKPLHTGGIIIMKDTSEEEEELVEPVSAHGPKIEEEEQEPEPPEPFEYID
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgataacatctgccgctggaattatttcactccttgatgaggaggaaccacagctcaag
gagtttgctctgcaaaagctagacttccttgtgaatgacttctgggctgaaatttcagga
tctgttgacaaaatcgaggtcctgtatgaagatgagacatttcggagcagagaatttgct
gccctggtggcctctaaggttttctaccatctcggagcctttgaggagtctctgaactac
gctcttggtgctggagatctcttcaatgtcacagatgactcagaatatgtggagaccatc
attgccaaatgcatcgaccactacaccaagttacgggtggagaatgctgagctgccggag
gatgaagagaagaagagcatcgaccctcgtctggagggcattgtcaacaagatgttcctg
cgttgccttaatgatcacaaatacaagcaggccattggcatcgccctggagaccaggcgc
cttgacatgtttgagaagaccatcttagaatcgaatgatgttagcggcctccttgcctac
agcctgaaggtgtgcatgtccctgatgcagaacaagaagttccgtaacgaggtgctgcgg
gttctggtcaagctctacatgaacttggaaaagcctgatttcatcaatgtctgtcagtgc
ctgatattcctggatgacccgcaggctgtcagtgacatcttggaaaagctggtgaaggag
gacaacctgctgatggcctaccagatctgctttgacctgtatgagagtgccagccagcag
ttcctctcttctgtcatccagaacctgagaactgttggaacaccaatccccgcagttcct
ggctctacaaacacaggcactgtgcccacaccagacaaagacagtgacgcaatggagaca
gatgacaaggctggcagctcccctgctggaaagccggcagacactaaagatgagcccaaa
gaccagaatgccaagatgatcaaaatcctcagtggggagatggccattgagctgcatctg
cagttcctaatccgaaataacaacacagacctaatgatcctcaaaaacacaaaggatgca
gtgcgaaattcagtgtgccacacagccacggtcatagccaactccttcatgcacacagga
accaccagtgaccagttcctcagagaaaacttggaatggcttgcaagagcaaccaactgg
gcaaaattcacagccacagcaagtctgggtgtcatccacaagggtcatgagaaggaggca
cttcagttaatggccacctacctgcccaaagacacctcccctggctctgcctaccaggag
ggaggaggcctgtatgctttgggactcatccacgccaatcatggtggggacatcatcgac
tacctgctcagtcagctcaagaatgccagcaatgatattgtccgtcatggtggtgctctt
ggtcttggtttggctgctttgggcacagctagacaggatgtttatgacctcctcaagtcc
aacctgtaccaagatgatgctgtcactggtgaagctgcgggtctggccctgggtctggtc
atgctgggctccaagtcagctcaggccatcgaggacatggtaggctatgctcaggagact
caacacgagaagatcctgcgtggcctggcagtgggaatcgctatggtcatgtatggacgc
atggaggaggctgatgctctcattgagagtctgtgcagagacaaggaccccatcctgcga
cgctctggaatgtacactgtgggcatggcttactgcggctccgggaacaacaaggccatc
cgacgcctactacatgtcgctgtgagtgatgtgaatgatgacgtcagaagggctgctgtt
gagtccattggcttcattttgttcaggacccccgagcagtgtccaagtgtcgtgtctctt
ttgtcagagagctacaatcctcatgtgcgttgtggggctgccatggctctgggtatctgc
tgtgctgggacaggcaacaaggaggccatcaacctgctggagcccatgaccaatgaccca
gtgaattatgtgagacagggcgccctcattgcttctgccctcatcatgatccagcagact
gaagtcacctgtcctaaggtgaaccagttcagacagctttatgcaaaggtgatcaacgac
aagcatgatgatgttatggccaaatttggggccatcctagcccagggaatcctcgacgca
ggtggacgtaacgtgaccatctctctgcagtccaggacgggtcacactcacatgccgtca
gtggtgggcctgctagtcttcacccagttctggttctggttccccctctcacacttcctg
tctctggccttcacacccactgctataatctgcctcaacaaggacctcaagatgcccaag
gtgcagtaccgctccaactgtaagccctccaccttcgcctacccaccagctctggaggtt
cccaaggagaaagagaaggagaaggtatccactgctgttctttccatcacagccaaagcc
aagaagaaggagaaggaaaagaaagaaaaggaggaggagaagatggaagtggaggtccag
gagggcgagaaggagaagaaggacgaggagaaggagaaagagaagaagaaggaggcggag
cctaacttccagctcctggagaacccggccagagtgatgccagctcagctcaaagtcctc
accatgcccgagacgtgccgctaccagcccttcaaaccgctccacacgggcgggatcatc
atcatgaaggacaccagcgaggaggaggaggagctggtggagcctgtgtcggctcatggc
cccaaaattgaggaagaggagcaggagccagagccccccgagccctttgagtacatcgac
gagtaa
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