Scomber scombrus (Atlantic mackerel): 133984352
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Entry
133984352 CDS
T10651
Symbol
nlgn1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133984352 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133984352 (nlgn1)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
133984352 (nlgn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
133984352
NCBI-ProteinID:
XP_062279609
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Position
8:3855007..4155011
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AA seq
719 aa
AA seq
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MLPVWFTNSIDIVSTYVQDQSEDCLYINIYVPTEDGPLTKKHTDDLGDSDRTDDEDIRES
GSPKPVMVFIHGGSYMEGTGNMFDGSILASYGNVIVITVNYRLGVLGFLSTGDQAAKGNY
GLLDQIQALRWTSENIAAFGGDPLRITVFGSGAGASCVNLLTLSHYSEGNRWSNSTKGLF
QRAIAQSGTALSSWAVSFQPAKYARMLARKVGCNLEDTVELVGCLQKKHYKELVDQDIQP
ARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVELIVDNENGVQAN
DFDYAVSSFVDDLYGYPEGKDILRETIKFMYTDWADRHNPETRRKTLLALFTDHQWVAPA
VATADLHSSFGSPTYFYAFYHHCQTEQVPPWADAAHGDEIPYVFGLPMIGPTELFPCNFS
KNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYNQKDQLYLHIG
LKPRIKEHYRANKVNLWLELVPHLHSLNEVTQLIPTTTKIPPPEATNRTPKPKVLVTKRP
NPTPFPTETQDSHNQPHLVDQRDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHDV
HRRCSPQRSAANDLAHTQEEEIMSLQMKKHSDLDRDCRGVGDSLHTHDVVLRTACPPDYT
LAMRRSPDDIPLMTPNTITMIPSTMGGLTSLHSFNTFPSSGQNNTLPHPHPHSHSTTRV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctgccggtgtggttcaccaacagcatcgacatagtgtccacatacgtccaggaccag
agcgaggactgcctctatattaacatctatgtccctactgaggatggtccccttacaaag
aaacacactgatgatttaggtgatagtgaccgcacggacgacgaagacatcagggagagt
ggaagccccaagccagtgatggttttcatccacgggggctcctacatggaaggaactggg
aatatgtttgatggcagcatcctggccagctatggaaatgtgattgtcataactgtcaac
taccggctgggcgtcctaggtttcctgagtacaggtgaccaggcagccaaagggaattac
ggtttgctggaccagatccaggctctgcgttggaccagtgagaacattgcagccttcggc
ggcgacccgttacgtatcactgtgttcggctcaggtgccggggcctcctgtgtcaaccta
ctcacactgtctcactactctgagggcaaccgctggagcaactccaccaaaggcttgttc
cagcgagccattgcccagagtggcacagctctgtccagctgggccgttagtttccaacca
gctaagtacgcccggatgctggcccgcaaggtgggctgtaaccttgaagacactgtagaa
cttgtggggtgtcttcagaagaaacattacaaagaactggtggatcaagacatccagcca
gcccgctaccacatcgcctttggacctgttatcgatggcgatgtcatacctgatgatcct
cagatactcatggagcaaggggagttcctcaactatgacatcatgctaggagtgaaccaa
ggcgagggcctaaagtttgtggagctgatcgttgacaatgaaaatggcgtccaggctaat
gacttcgactatgccgtgtccagctttgtggatgatctctatggttacccagagggtaaa
gacatcctccgagagactatcaagttcatgtacaccgattgggccgacaggcacaaccca
gaaacacgccggaagacattgttggctctcttcaccgatcaccagtgggtggcaccagct
gttgcgacagctgaccttcactccagctttgggtcacctacatacttctatgccttctac
caccactgtcagacagaacaggtgccaccgtgggcagacgcagcacatggagatgagatc
ccatatgtgttcggcctgccgatgattggaccaacggagctgtttccctgcaacttctcg
aagaatgacgtgatgctcagtgccgtggtcatgacttattggacaaacttcgcaaaaaca
ggggacccaaaccagccagtcccccaggacaccaagttcatccacaccaaacccaaccgt
tttgaagaagtagcatggacacgttacaaccagaaagaccagctttacctgcacattggc
ctgaagccccgcatcaaagagcactaccgtgccaacaaggtcaacttatggttggagctg
gtccctcatctacacagcctcaatgaggtcacccagctcatccccaccaccaccaagatt
cctcctccagaggctaccaaccgcaccccaaagcccaaggttctggtgaccaagcgcccc
aacccaactcccttccccactgagacccaagacagccacaaccagccacacctggtggac
cagcgtgactactccactgagctgtcggtgaccatcgctgtgggagcctccctgctcttc
ctcaacatcctggccttcgccgctctttactacaagaaggacaagcgcaggcatgatgtc
cacaggcgctgcagccctcagaggagtgccgccaacgacctggcccacactcaggaggag
gagatcatgtccctgcagatgaagaagcactcggacctggaccgggactgcaggggtgtg
ggcgattccttgcacacacacgacgtggtgctgaggactgcctgcccgccggactacact
ctggccatgaggcgctcaccggacgacatcccgctcatgactccaaacaccataaccatg
atccccagcaccatgggggggctcacctcgctccactctttcaacaccttccccagcagc
gggcagaataacaccctgccccacccacacccacactcacactccaccacccgggtatag
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