Entry |
|
Symbol |
nlgn1
|
Name |
(RefSeq) neuroligin-1 isoform X1
|
KO |
|
Organism |
ssco Scomber scombrus (Atlantic mackerel)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ssco00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133984352 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:ssco04131]
133984352 (nlgn1)
Membrane trafficking [BR:ssco04131]
Exocytosis
Calcium ion-dependent exocytosis
Others
133984352 (nlgn1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8:3855007..4155011
|
AA seq |
719 aa
MLPVWFTNSIDIVSTYVQDQSEDCLYINIYVPTEDGPLTKKHTDDLGDSDRTDDEDIRES
GSPKPVMVFIHGGSYMEGTGNMFDGSILASYGNVIVITVNYRLGVLGFLSTGDQAAKGNY
GLLDQIQALRWTSENIAAFGGDPLRITVFGSGAGASCVNLLTLSHYSEGNRWSNSTKGLF
QRAIAQSGTALSSWAVSFQPAKYARMLARKVGCNLEDTVELVGCLQKKHYKELVDQDIQP
ARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVELIVDNENGVQAN
DFDYAVSSFVDDLYGYPEGKDILRETIKFMYTDWADRHNPETRRKTLLALFTDHQWVAPA
VATADLHSSFGSPTYFYAFYHHCQTEQVPPWADAAHGDEIPYVFGLPMIGPTELFPCNFS
KNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYNQKDQLYLHIG
LKPRIKEHYRANKVNLWLELVPHLHSLNEVTQLIPTTTKIPPPEATNRTPKPKVLVTKRP
NPTPFPTETQDSHNQPHLVDQRDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHDV
HRRCSPQRSAANDLAHTQEEEIMSLQMKKHSDLDRDCRGVGDSLHTHDVVLRTACPPDYT
LAMRRSPDDIPLMTPNTITMIPSTMGGLTSLHSFNTFPSSGQNNTLPHPHPHSHSTTRV |
NT seq |
2160 nt +upstreamnt +downstreamnt
atgctgccggtgtggttcaccaacagcatcgacatagtgtccacatacgtccaggaccag
agcgaggactgcctctatattaacatctatgtccctactgaggatggtccccttacaaag
aaacacactgatgatttaggtgatagtgaccgcacggacgacgaagacatcagggagagt
ggaagccccaagccagtgatggttttcatccacgggggctcctacatggaaggaactggg
aatatgtttgatggcagcatcctggccagctatggaaatgtgattgtcataactgtcaac
taccggctgggcgtcctaggtttcctgagtacaggtgaccaggcagccaaagggaattac
ggtttgctggaccagatccaggctctgcgttggaccagtgagaacattgcagccttcggc
ggcgacccgttacgtatcactgtgttcggctcaggtgccggggcctcctgtgtcaaccta
ctcacactgtctcactactctgagggcaaccgctggagcaactccaccaaaggcttgttc
cagcgagccattgcccagagtggcacagctctgtccagctgggccgttagtttccaacca
gctaagtacgcccggatgctggcccgcaaggtgggctgtaaccttgaagacactgtagaa
cttgtggggtgtcttcagaagaaacattacaaagaactggtggatcaagacatccagcca
gcccgctaccacatcgcctttggacctgttatcgatggcgatgtcatacctgatgatcct
cagatactcatggagcaaggggagttcctcaactatgacatcatgctaggagtgaaccaa
ggcgagggcctaaagtttgtggagctgatcgttgacaatgaaaatggcgtccaggctaat
gacttcgactatgccgtgtccagctttgtggatgatctctatggttacccagagggtaaa
gacatcctccgagagactatcaagttcatgtacaccgattgggccgacaggcacaaccca
gaaacacgccggaagacattgttggctctcttcaccgatcaccagtgggtggcaccagct
gttgcgacagctgaccttcactccagctttgggtcacctacatacttctatgccttctac
caccactgtcagacagaacaggtgccaccgtgggcagacgcagcacatggagatgagatc
ccatatgtgttcggcctgccgatgattggaccaacggagctgtttccctgcaacttctcg
aagaatgacgtgatgctcagtgccgtggtcatgacttattggacaaacttcgcaaaaaca
ggggacccaaaccagccagtcccccaggacaccaagttcatccacaccaaacccaaccgt
tttgaagaagtagcatggacacgttacaaccagaaagaccagctttacctgcacattggc
ctgaagccccgcatcaaagagcactaccgtgccaacaaggtcaacttatggttggagctg
gtccctcatctacacagcctcaatgaggtcacccagctcatccccaccaccaccaagatt
cctcctccagaggctaccaaccgcaccccaaagcccaaggttctggtgaccaagcgcccc
aacccaactcccttccccactgagacccaagacagccacaaccagccacacctggtggac
cagcgtgactactccactgagctgtcggtgaccatcgctgtgggagcctccctgctcttc
ctcaacatcctggccttcgccgctctttactacaagaaggacaagcgcaggcatgatgtc
cacaggcgctgcagccctcagaggagtgccgccaacgacctggcccacactcaggaggag
gagatcatgtccctgcagatgaagaagcactcggacctggaccgggactgcaggggtgtg
ggcgattccttgcacacacacgacgtggtgctgaggactgcctgcccgccggactacact
ctggccatgaggcgctcaccggacgacatcccgctcatgactccaaacaccataaccatg
atccccagcaccatgggggggctcacctcgctccactctttcaacaccttccccagcagc
gggcagaataacaccctgccccacccacacccacactcacactccaccacccgggtatag |