Scomber scombrus (Atlantic mackerel): 133984353
Help
Entry
133984353 CDS
T10651
Symbol
adamts10
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 10
KO
K08625
a disintegrin and metalloproteinase with thrombospondin motifs 10 [EC:3.4.24.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133984353 (adamts10)
Peptidases and inhibitors [BR:
ssco01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
133984353 (adamts10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP_1
ADAMTS_CR_2
Reprolysin_5
Reprolysin_3
PLAC
ADAMTS_CR_3
Reprolysin_2
TSP1_CCN
TSP1_spondin
Reprolysin_4
DUF4953
Motif
Other DBs
NCBI-GeneID:
133984353
NCBI-ProteinID:
XP_062279615
LinkDB
All DBs
Position
8:23034179..23084485
Genome browser
AA seq
1110 aa
AA seq
DB search
METLWRTGLVCTVIVVLVATEVAGGHRDEFAQSQAAFLSSLGQYEIAIPVRVGPDGETLD
TAMSQHHHRRRRSTEDKPPDSLFYQLSTSRNNFLLNLTLQGGLLSRQFRVEYWKRGRLAW
SHPYSPHCHYVGHLQDQPHSSKVALSNCNGLQGVIVAGGEEYLIEPLVSPDNQTRTEKGE
RAEGRPHVVYKRSSLRHQYKGQSCGVIDEKPMKGASWWQRTLKTPPHHVGRGQLPLKRSV
SRERYVETLVVADKMMVGYHGRRDIEQYILAVMNIVAKLFQDSSLGNAVNIVVTRLILLM
EDQPTLEINHHAGKSLDSFCKWQKTIQHRSSYGNAIPDNGIAHHDTAVLITRYDICIQKN
KPCETLGLAPVGGMCEPERSCSINEDIGLGTAFTIAHEIGHTFGMNHDGMGNACGPRSQE
TAKLMADHITMKTNPFIWSACSRDYITSFLDSGMGSCLNNIPAKQEFVYPTTAPGQAYDA
DEQCRFQYGVRSRQCKYAEVCSELWCMSKSNRCITSSIPAAEGTICQTNTIEKGWCYKRV
CVAYGTRPEGVDGGWGLWSPWEECSRTCGGGVSSSIRHCDSPRPTIGGKYCLGERKRFRS
CNIDECPAGSRDFREMQCSDFDSVPFRGKFYTWKPYRGGGVKPCSLNCLAEGYNFYTERA
PAVVDGTPCRDDSLDVCVNGECKHVGCDRILGSDVREDRCRICGGDGSSCASVEGVFNDS
LPEGGYEEVVRIPKGSVFIHIQELNISLNYLVLKSKGDQYFINGKLTIDTPRRFEIAGTT
FHYRRPTDAPETLEALGPTNMTLIVMVLVREENPGIHYRFNPPLNRDLLSGFAWHYTSWS
RCSALCAGGVQTQQVVCKKQGDYTVVYNHFCDKKNKPKEKRRSCNTEPCSPSWWTGEWSE
CSRSCNGGVRTREVLCKRRISASEEKVLDDSACTTTRPSLTEPCSNHSCPPEWLALDWSE
CTPGCGPGYRHRVVLCKSGESGDTLPESKCPKHGRPTSRVRCNLQRCPPPQWVTGPWGEC
SAKCGLGQEMRSVQCLTHTGQPSNECLEHQRPSAMQQCKSKCDLSLPISTDNPEECKDVN
TVAYCPLVLRFKFCSRPYFRQMCCKTCQGH
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctatggaggactggtctggtctgcactgtcatcgtcgtcctggttgccacc
gaggtcgcaggaggtcacagagatgagttcgctcagtcacaagctgccttcctgtccagt
ctaggccagtatgagattgccatcccagtacgtgtaggaccagatggtgagacgctggac
acagcaatgtctcaacaccaccacagaagaagacgcagcactgaagacaagccgccagac
tctctcttctaccagctctccacatcacgtaacaacttcctgctgaacctgaccctgcag
ggaggtctgctttcccggcagttcagggtggagtactggaaaagaggtcgattagcctgg
agtcacccatactctccccactgccattatgtaggacacctccaagaccagcctcactcc
agcaaagtggccctcagcaactgtaacggcctgcagggggtgattgttgcagggggagag
gagtacctgattgaaccccttgtctcaccagataaccagaccaggacagagaagggggag
agagcagaggggcgcccccatgtggtttacaagcggtcatctctccgccatcagtacaag
ggccaatcttgtggagtcattgatgagaagccgatgaagggggcgtcatggtggcagcgg
actctgaagacgcctcctcatcacgtcggccgcggccagctgccactaaagcgctcggtg
agccgggagcgctacgttgagacgctggtggtagctgacaagatgatggtgggttaccac
ggtcgcagggacatcgagcagtacatcctggctgtcatgaatattgttgccaaactgttc
caggattctagcctcgggaatgcagtcaacattgtggtgactcgactcatcctgctcatg
gaggaccagccaacactagagatcaaccatcatgcagggaagtctttagacagcttctgt
aagtggcagaaaaccatccagcaccggagcagctatgggaacgctatacccgacaacggc
atcgctcaccacgacaccgctgtgcttatcaccagatacgacatctgcatccaaaaaaac
aagccctgtgaaaccctaggtctggctcctgttggagggatgtgtgagccagagagaagc
tgtagcatcaatgaggacatcggccttggaacagctttcaccatcgcccatgagattgga
cacacgtttgggatgaaccatgacgggatgggaaacgcctgtgggccccgcagccaggag
accgccaagctgatggccgaccacatcaccatgaagacaaacccgttcatctggtcggcc
tgtagccgagattacatcaccagcttcctggattcaggtatgggctcctgtctgaacaac
atccccgccaagcaggagtttgtgtaccccactacagccccgggtcaggcctacgatgca
gacgaacagtgccgtttccagtatggcgtcagatctcgacagtgtaaatatgcggaagtt
tgcagtgaactttggtgcatgagcaagagcaaccgttgcatcaccagcagcattcccgct
gcagagggaaccatctgtcagaccaacaccatagagaaagggtggtgctacaagagggtg
tgcgtggcctatgggacgcgtccagagggcgtggacgggggctggggactgtggtcaccc
tgggaggagtgcagcaggacttgtggaggtggagtctcatcctctatcagacactgcgac
agccccaggccaaccattggtggaaagtattgtctgggggagagaaagcgcttcaggtcc
tgcaatattgatgagtgccccgcaggctcacgggatttccgggagatgcagtgctctgac
ttcgacagcgttcctttccgggggaaattttacacctggaagccatacagaggaggtggg
gtgaagccttgctctctcaactgcctcgctgaaggatacaacttctacacagagcgggct
ccagctgtggtggacggcacaccttgccgagatgactctctggacgtgtgtgtaaacgga
gagtgtaagcacgtaggctgcgatcgaatcctcggctcagacgttcgtgaggaccgctgt
cggatctgtggaggtgatgggagcagctgcgcatctgtggagggagtcttcaacgactca
ctgcccgaaggaggttatgaagaggttgtcagaattcctaaaggatccgtgttcatccac
atacaagagctcaacatctccctaaactaccttgtgctgaagagtaaaggcgatcagtac
tttatcaatgggaagctgacaattgacacgccacgcaggtttgaaatcgctggaacaacc
ttccactataggagacccactgatgcaccagaaactcttgaggctctggggccaacaaat
atgaccctcatcgtcatggtgctggtgagggaggagaacccggggatccactatcgtttc
aaccccccactcaacagggatctactgagcggctttgcctggcactacacatcctggtca
cgctgctcggctctctgtgctggaggtgtacagacccaacaggtggtgtgtaagaagcag
ggagattatacagtcgtctacaaccacttctgtgataagaagaacaaacccaaagagaag
agaagatcctgcaatactgagccatgctccccaagctggtggacaggagagtggtcggag
tgcagccgcagctgtaacggaggtgtgcgtacacgggaggtgttatgtaaaaggaggatc
tctgcgtcagaggagaaggtcctggacgactcagcctgcaccaccacacgcccctcactc
actgagccctgcagcaaccacagctgcccccctgaatggctggccctggactggtcagag
tgtacgcccggctgtggtcctggctacaggcaccgtgtggtcttgtgcaagagcggggag
agtggcgacacgctgccagagtccaagtgccccaagcatggccggcccacctccagagtg
cgctgtaacctgcagcgctgccctccgcctcagtgggtgacgggtccctggggagagtgc
tctgccaaatgcggtctgggtcaggagatgcgttcggtgcagtgtctgactcacaccggc
cagccgtccaatgagtgtctggagcatcagcggccatcagccatgcagcagtgcaagagc
aaatgtgacctcagtctgcccatcagtacagacaaccctgaagagtgtaaagatgtgaac
actgtggcctactgccccctggtgctcaggttcaagttctgcagccggccatattttaga
caaatgtgctgcaaaacctgccagggacactga
DBGET
integrated database retrieval system
