Scomber scombrus (Atlantic mackerel): 133984361
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Entry
133984361 CDS
T10651
Name
(RefSeq) vitellogenin-2-like
Organism
ssco Scomber scombrus (Atlantic mackerel)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vitellogenin_N
Vit_open_b-sht
Vit_b-sht_shell
VWD
Motif
Other DBs
NCBI-GeneID:
133984361
NCBI-ProteinID:
XP_062279626
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Position
8:complement(17168129..17177374)
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AA seq
1707 aa
AA seq
DB search
MRVLVLALTVAFAACHQVSFAPEFATGRTYVYKYEALLMGGLPEEGLARAGVKVLSKVMI
SAAAPDTFILKLVDPEIFEYSGIWPKDAFIPATKLTSALAAQLLTPIKFEYANGVVGKVF
APAGVSATVLNVYRGILNIFQMNIKKTQNVYELQEPGVQGVCKTHYVISEDAKAERILLT
KTKDLNHCQERIIKDIGLAYTEKCAECEARGKTLKGAAAFNYVMKPAPTGALILEATATE
LIQFSPFNILNGAAQMEAKQILTFLEVAKTPVEPIRADYLHRGSLQYEFGSELLQTPIQL
LRISNAEAQIVEILNHLVTFNVAKVHEDAPLKFIELVQLLRVAKLESIEALWTQFKVRPD
YRHWILNAVPAIGTHTALRFLKEKFIAGELTIAEAAQALLASVHMVTADLEAIRFAEGLA
MNHKIRENPVLREIVMLGYGTLVAKYCAENPSCPAALMKPIHEIAVQAVARSDIGELTVA
LKVLGNAGHPASLKPILKLLPGFGSAAANLPLRVHIDAVLALRNIAKKEPKMIQEMAVQL
FMDKALHPELRMVAAVVLFETKLPMGLVTTLADTLLKETNMQVASFVYSYMKAMTKNTAP
DFASVAAACNVAVKILSPKLDRLCYRFSRALYFDAYSNPWMMGAAASAFYVNDAATILPK
AILAKARTYLAGAYADVLELGVRTEGIQEALMKIPKAPENAERITKMKQVMKALSEWRAH
PSSQPLASVYVKFFGQEIAFANIDKAMVDQIIELATGPAIHTYGRKALDALLSGIAVHYV
KPMLVAEVRRIMPTAVGLPMELSFYTAAVAAASVELQATVTPPLPETFHAAQLLKSDINL
RAAITPSVSMHTYAVMGVNTALIQASLLSRARVHTIVPAKMEARIDMIKGNFKFQFLPVQ
GVDKIASALVETFAIARNVEDLAAAKITPMIPAEAAALLSRQTFSSRVSRMASSLLGSIS
ASSEIIPVDVPSKIVNKRKIPRAFEKKMCAAFETFGIKACTEIESHNAAFIRNCPLYAII
GKHAVLVDVAPAAGPVIEKIEIEIQVGDKAAEKIIKVINLSEEDDILEDKNVLMKLKKIL
VPGLKNSTSSSSSSSRSSSSRSSSSSSKRSSSASSSVSSKSSSSSSSRRQSKMVDVVAQG
SKVSKRLSSRSSSASSSRSSSRFSSPSSSRSSSLSSSRSSSSSSSRSSSMSKQDLYDMKF
IKSHIHQHAVSTARANSKSSAHSFEAIYNKAKYLASTVTPAVTILIRAVRADHKVQGYQI
AAYFDKTTARLQFIFANLAENDHWRICADGVLLSNHKLMAKIAWGIECKQYATEITAETG
LVGKVPAFRLKLTWDKLPQRMRRYAQQLSEYISRITQYIGVTQSKVKNERNQIKLTVAVA
SEKTLNVVLKTPKRTIYKRDVDLPVYLPFGDTAAELEPYQDSLADKITYMVTKAHAAKCA
MVKDTLITFNNRKYKNEMPHSCYQVLAQDCSSELKFMVLLKRDQTQEQNEINVKIADIDV
DMYLKDSAVMVKVNGVEIPINNLPYQHPTGKIQIRKRGDGVALHAPSHGLQEVFFELNAL
KVKVVDWMRGQTCGLCGKADGEFRQEFRTPNERQTKDAASYAHSWVLPGKSCRDASECYM
KLESVKLEKQMILYGQESKCYSVEPVLRCLPGCMPVRTTTVTVGFHCLPTDSNLNRSEGL
SSIYYKSEDMKDSAEAHLACRCNAQCA
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgctagtactagctctcaccgtggcctttgcagcatgccaccaggtcagcttt
gccccagaatttgcaactggaaggacttacgtgtacaaatatgaagcacttctgatgggc
ggcctgcctgaggagggtctggcacgggccggtgtgaaagtgttgagcaaagttatgatc
agtgcagcagctcctgacaccttcatactgaagcttgtagaccctgaaatctttgagtac
agtggcatctggcccaaagatgctttcatcccagccaccaagctcacctcagccctggct
gctcagctcctgacacccatcaagtttgaatatgccaacggtgttgtcggcaaagtattc
gcacccgctggcgtctctgcaactgtgctgaatgtctacagaggaatccttaacatcttc
cagatgaacatcaagaagacacagaatgtctatgagctacaggagcctggagttcaggga
gtgtgcaagacccactacgtcatcagtgaggacgcaaaggctgaacgcatcttgttgacc
aagaccaaggacctgaaccactgccaggagagaatcattaaggacatcggcttggcttac
acagagaaatgtgctgagtgtgaggctagaggaaagaccctgaagggagccgcagccttt
aactatgtcatgaagccagcacccacaggtgctctgatcttggaggcaactgctacagag
ctcatccagttctcacctttcaacatcttgaacggcgccgcccagatggaggctaagcaa
atcttgaccttcctggaggttgcaaagaccccagtggagcccatcagagctgactatctt
caccggggatccctgcagtatgagttcggcagcgagcttctccagacaccgatccagctt
ctgaggatcagcaatgctgaggctcaaattgttgagattctgaaccacctagtgaccttc
aatgtggccaaggtccatgaagacgcacctctgaagtttattgagctcgtccagttgctg
cgtgtggccaaacttgagagtattgaggccctctggactcagttcaaagttagacccgat
tacaggcactggattttgaatgccgttcctgccattggtactcatactgctctgaggttc
ctcaaggagaagttcatcgctggtgagctgactattgctgaagctgcccaagctctgctg
gcttctgtgcacatggtgacagctgacctggaggccatcaggtttgctgaaggcttggct
atgaaccacaaaattagagaaaacccagtcctgcgtgagattgtcatgctgggctacggc
accctggtggctaaatactgcgcagagaacccatcttgcccagctgcgcttatgaagccc
atccatgagatcgctgtccaggctgttgccagaagtgatattggggaactcactgttgct
cttaaagttctgggtaacgctggacatcctgccagccttaagccaatcctgaagctcctg
cctggcttcggcagtgctgctgccaatctgccactgagagttcacattgatgctgttctg
gccctgaggaacattgccaaaaaggagcccaagatgatccaggaaatggctgttcagctg
ttcatggataaggctctccacccagagctccgaatggttgctgctgtcgtgttgtttgag
accaaactgcccatgggtctggtgactacccttgccgacacactcttgaaagaaacaaac
atgcaggttgctagctttgtctactcttacatgaaggccatgacgaagaacactgcccct
gactttgcctctgttgctgctgcctgtaatgttgctgtgaagatcctcagccccaaactt
gacagactgtgctaccgcttcagcagagctctctattttgatgcctacagcaacccctgg
atgatgggtgccgctgccagtgccttctatgtcaatgatgctgcaactattttgccaaaa
gccattttggccaaagctcgcacctacctggcaggagcttatgctgatgtcttagagttg
ggagtgagaacagagggaatccaggaggccttaatgaaaatccccaaggctcctgagaat
gctgaaaggatcaccaagatgaaacaagttatgaaggctctctccgaatggagggctcat
ccttcaagccagcccctggcctctgtgtatgtgaaattcttcggacaggaaattgcattt
gccaacattgacaaagccatggttgatcagattattgagcttgccactggacctgcaatt
cacacttacggaaggaaggctttggatgcgctgctgtctggtatagctgtgcattatgtt
aagcctatgctggttgctgaggttcgtcgcatcatgcccactgctgttggtctgccaatg
gagctaagtttctatactgctgctgtggctgctgcatctgttgaactccaagccactgtg
acaccacctctacccgaaaccttccatgctgctcagcttcttaagtccgatatcaaccta
agggcagcaattaccccaagtgtctccatgcacacctatgcagttatgggcgtgaatact
gctttgatccaggcttccttactgtcaagagccagagttcatacaattgttcctgcaaag
atggaagcaagaattgatatgattaagggcaacttcaagttccagttcctgcctgttcag
ggtgtcgataagattgcatctgcacttgttgagacctttgctattgcaagaaatgtggaa
gacctcgcagccgccaagataacaccaatgattccagctgaagctgcagctctgctgtca
agacagaccttctcctcaagagtttctaggatggcatcctccctgcttggtagcatttca
gcatcatcggaaatcattcctgttgatgtgccaagcaaaattgtcaacaagaggaaaatc
cccagggcctttgagaagaaaatgtgtgctgcatttgaaacctttggaatcaaggcatgc
acagagatcgaatctcacaacgccgctttcatcagaaactgtccactctacgccataatt
ggaaaacatgctgtcttggttgatgttgctccagctgctggacccgtcattgagaagatt
gaaattgagattcaggttggcgataaagcagcagaaaagatcatcaaagtgattaacttg
agcgaggaagatgatattcttgaggacaagaatgtcctgatgaaactcaagaaaatcctg
gttcctggtctgaagaacagcacttcctccagctccagcagctcccgctccagcagctcc
cgttccagcagctccagctctaagcgcagttcaagcgcctcttcctctgtatcatccaag
tcttcctccagctcctcttctcgccgccagagcaagatggttgacgttgttgcccaggga
agcaaggtatcaaagagactgagcagccgctccagcagtgcctccagcagtcgatcaagt
agccgcttcagtagcccttcaagcagccgctcatctagcctgtctagcagccgctcttcc
agctccagctcctccaggtccagctccatgtcaaagcaagacctgtatgacatgaagttc
atcaagagccacatccaccagcatgcagtctccacagcccgtgcaaacagcaagagcagc
gcccacagcttcgaagccatctacaacaaggccaagtacctcgctagcaccgtcactcct
gctgtgaccattctcattcgcgctgtaagagctgaccacaaggttcagggataccagatt
gcagcttactttgacaaaacaactgccagactgcagtttatttttgccaacctggctgag
aatgaccactggagaatctgcgctgatggtgtcctgctgagcaaccacaagctgatggcc
aagattgcctggggaattgaatgcaaacaatacgcaactgagatcacagctgaaactggt
cttgtgggtaaagtgcctgccttccgcctgaagctgacctgggacaaacttccacaacgc
atgaggcgctatgcacagcagctgtctgagtacatttcacgtatcactcagtacatcgga
gtaacccagtcaaaggtcaagaatgaacgtaatcagatcaaactgactgtggctgttgct
tcagagaaaaccctgaatgttgtgttgaagacaccaaagaggaccatctacaaacgtgat
gtggatctccctgtttatctgccatttggagacactgctgcagagctggaaccataccag
gacagcttagctgacaagatcacctacatggtcaccaaggctcacgcagctaagtgtgcc
atggtcaaagacactctgattaccttcaacaacaggaaatacaagaacgaaatgccccac
tcttgctaccaggttttggctcaggattgcagctcagaacttaaattcatggttctgctg
aagagagaccaaacacaggaacagaacgaaatcaatgtgaagattgcagacattgacgta
gacatgtatctgaaggacagtgctgtcatggtgaaggtcaacggagtagagatccccatc
aacaacctgccataccagcatccaacaggcaagattcagatcagaaagagaggtgacggc
gttgctcttcacgctcccagccatggtcttcaggaggtcttctttgagctgaacgcactg
aaggttaaagttgtggattggatgaggggacagacctgtggactctgtggaaaggctgat
ggggaattcagacaggagttccgcacacccaacgaacggcagaccaaggacgcagccagc
tacgctcattcctgggttttgcctggaaagagctgccgcgatgcctctgagtgctacatg
aaacttgaatctgtgaaactggaaaagcaaatgatcctctatggccaggagtccaaatgc
tactctgttgagcctgtgttgcgctgcctgcccggctgcatgccagtgagaaccaccact
gtcactgttggcttccactgcctgcctactgattccaacctgaatcgttctgagggtctg
agcagcatttattataaaagcgaggacatgaaagattcagctgaggcccacctggcctgt
cgctgcaacgcccagtgcgcttaa
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integrated database retrieval system
