Scomber scombrus (Atlantic mackerel): 133984469
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Entry
133984469 CDS
T10651
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133984469 (polrmt)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133984469 (polrmt)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
133984469 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
133984469
NCBI-ProteinID:
XP_062279793
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All DBs
Position
8:complement(11591350..11640343)
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AA seq
1322 aa
AA seq
DB search
MSLLRVCAFAKCLNRRSLFEKRAVRESAVGYCRLCLSIRNGAVRQITETPLQLQRRNISF
VIPKVEDAKKRVLKQSQLLDVLDARIQQLQSDIILDVQQAKVQFVNVPSPGRVSSARGPK
SLPQDTADIPKSGEVIVKGTSKSQPSRWIEKITQEKKKKQLHLKNVKEKPATKSKGSKSH
SLLPGTSHKTISTTAKKTAPLTKKSTGRMKVSDKIRAAVSSVATTTTAATTAAGTTATSQ
KVSKGKRKNSKIQVPGDEDQRAAELAEVEMLERRLAQQEDQWTSASNPEPLQEGSEGTGY
GDIQFSIRSYLEASVFAGHIDRAHSFLLSQHRVLRRRKHLNTDIYNIMMRVSAKKGTLNQ
IGRMFILLEEASLKPNLGSYCAALECMGRNPNCSPQVINRCLTQIEEDGLSLDNLFSQCV
FREDERDMVLKAIHTIQPDYQPSVNLITEECSSSLVQDYYAQRANHQYPKLDFTQVELQE
RFKQQLDMEQACTVTIDSVEGAKPVTENMAKMRELLAEQRVQWQKILLQALRESKMILAK
TNIKDYKLNLYPYLCLLEDREYVDIMIQSVANLPPSGESLKTLGRDLGNRVYTKYSVRQK
HKNETVKKLGNIYDAYTDLLAKDTKVYDVHPREQWCKLETEQCSGPTLHGGENHWPYIVT
LELGTYLVDIMVKNLKINSDILNSAYDRKRIPILYHMYTFRSTRQVGFIKPHPILTQMQQ
EAMETKLTFDSYVIPMLCPPVPWTSAKFGAYLLTPTKLMRTVDGATQHDVLLDKCQNLHA
VLDSLNQLGNCAWRINKPLLDIIISIFNDRGSEKLDIPPPMSEAPKIPHFNPHDPTYTAS
EKAPMKREMINAKKKCGEMHSLRMDALYKLSIANHMRDKLFWFPHNMDFRGRTYPCPPYF
NHLGSDVTRAILLFAEGKPLGPKGLDWLKIHLVNLTGLKKRSSLQGRLEYANTIIEDILD
SANNPLNGKKWWMNADEPWQALACCMEIADAVRSPDPTQFISHFPVHQDGSCNGLQHYAA
LGRDVIGATSVNLMPCDEPQDVYSGVAQQVEEFRARDAENGQKIAQVLEGFISRKVVKQT
VMTVVYGVTRYGGRLQIEKRLKEIDEFPKEHIWDASNYLVRMVFSGLKEMFTGTREIQDW
LTESARLISKSGHTVEWVTPLGLPIIQPYHRVRNQVLKSTMQHINLQITHDSKERPDTVK
QKNAFPPNFIHSLDSTHMMLTSLYCYSAGLTFVSVHDCFWTHALTVDTMNKVCREQFVAL
HSQPILQELSNFLLQKYCTGLAADAKNKKYQEYRRLVLLLAKVPQTGDFDLQQVKKSTYF
FS
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcctcagagtgtgtgcctttgccaaatgtctgaatcgtcgcagtctgtttgaa
aagcgtgctgtccgtgagtctgctgtgggctactgccggctgtgtctgtcgataagaaac
ggcgcagtcagacagataacagagacaccactgcagcttcaaagaagaaatatctcattc
gtaatcccaaaggtagaagatgcaaagaagcgtgtactgaaacagtctcagctgctagat
gtgcttgatgccaggatccagcaactacaatctgacatcattctagatgtccaacaagca
aaggtgcaatttgttaatgtcccttctcctgggagggtttcatctgccaggggtcccaaa
agtctacctcaggatacagctgacattcctaaatctggagaggtcattgttaaaggaacc
tctaaatcccagcccagccgctggatagaaaaaataactcaggaaaagaaaaagaaacaa
ctgcacctgaagaatgtcaaggagaaaccagcaacaaaatctaaaggtagcaaaagccac
tcattgctccctggtacatcacataaaactatttctaccacagctaaaaagactgcaccg
ttgactaagaagagtacaggtcgcatgaaagtgtctgataaaattcgtgccgcagtttct
tctgttgctaccaccactactgctgctactactgcagcagggacaacagccacatcacaa
aaagtgtctaaggggaaaaggaagaactctaaaattcaggttcctggtgatgaggaccaa
agggctgcggagttggctgaggtagagatgctggagaggaggctcgctcaacaagaggac
cagtggacgtctgctagtaacccagagcctttacaggagggcagtgaaggaactggatat
ggggacatccagttcagcattcgctcttacctggaggcaagtgtgtttgcggggcacatt
gaccgagcacacagtttcctgctcagccagcacagggttctgagacgacgtaaacatctc
aacacagacatctacaacatcatgatgagggtctctgccaagaagggaacactgaatcag
atcggtcgcatgtttatactgttagaagaggccagtctgaagccaaatctgggatcgtac
tgtgctgctctggagtgtatgggccgcaatcccaattgctctccacaggtcatcaatagg
tgcctgacccagatagaggaggatggcctttctttggacaatctcttcagccagtgtgtc
ttccgggaggatgagagagacatggtgctgaaggccatacacaccatccagccagactac
cagcccagcgtgaacctgatcacagaggagtgctcttcttcgttggttcaggactactat
gcacagagggcaaaccatcagtaccccaaactggactttactcaggtggagctccaggag
cgtttcaaacaacagctcgacatggagcaggcctgcactgtcaccatcgactctgtggag
ggtgccaagcccgtcactgaaaacatggccaaaatgagggagctgctggcggagcagcgg
gtacagtggcagaagatcctcctccaagccctgagggagagcaagatgatcctggctaag
accaacatcaaggactacaagcttaacctttatccctacctctgtctgctggaggataga
gagtatgtggacatcatgatacagagtgttgccaatctacctcccagcggagagtcactg
aagactttgggcagggatcttggcaacagggtgtacaccaagtactctgtgcgacagaag
cacaaaaatgagacggtgaagaagttgggcaacatttatgacgcttacacagacctgctg
gccaaagatactaaggtttatgatgtccatcccagagagcagtggtgtaagctagagaca
gagcaatgttcaggacccacgctgcatggaggcgagaatcactggccatatatagtaact
ctggagctgggcacttacttggtggatataatggtcaagaaccttaaaattaatagcgac
atcctgaactcggcctacgacaggaagcgcatccccatcctctaccacatgtacaccttt
cgcagcacccgacaggtcggcttcatcaagccccaccccatcctgactcagatgcagcag
gaggccatggagactaagctgacctttgactcctacgtgattccaatgctgtgccctcct
gttccctggacgtctgccaagtttggagcttacctgctgacacctaccaagctgatgcgt
acagtggatggggccacccaacatgatgttttgttggacaaatgccagaacctccatgca
gttctagactctcttaaccagctgggtaactgtgcctggaggatcaacaaaccgttacta
gatattattatctccatcttcaatgatcgtggtagtgagaaactagacatccctcctccc
atgtcagaggcccccaaaatacctcacttcaacccccacgatcccacttataccgccagt
gagaaggcccccatgaaaagggagatgatcaatgccaaaaagaaatgcggtgagatgcac
agcttacgtatggatgctctctataaactctccatcgccaaccacatgagagataagctc
ttctggttccctcacaacatggatttccggggacgtacctacccctgccctccatacttt
aatcacctgggaagtgacgtgactcgggccatccttttgtttgcagaggggaagcccctc
ggtcccaagggcctggactggctaaaaatccacttagtcaatctgacagggttaaagaag
aggagctcactacagggaagactggagtacgccaacactatcatagaagacatactggat
tctgctaacaaccctctcaatggtaagaagtggtggatgaatgcagatgagccttggcag
gctctggcgtgctgcatggagatagccgatgctgtgagatctccagatccgacacagttc
atctctcattttcctgttcaccaggacggctcctgtaacggtctccagcactatgccgct
ctaggcagagacgttattggtgccacatcagtcaacctcatgccctgtgatgagccccag
gatgtgtacagcggagtagcacaacaggtggaggagttccgagcacgggatgcagaaaac
ggccagaagatagctcaagtcctggagggcttcatcagcaggaaggtggtcaaacagacc
gtgatgactgtggtgtacggggtcacacgctacgggggacggctccagatagagaaaaga
ctgaaggagattgatgagttccccaaggagcatatatgggatgcttctaattacctggtg
cgtatggtgttcagtggcttaaaggagatgtttacagggaccagagagatccaggattgg
ctgaccgagagcgccaggctcatctccaagtctggacacactgtggagtgggtgacaccc
ctgggtttacctatcatccagccctaccaccgcgtacgcaaccaagtgctgaagagtacc
atgcagcatatcaacctccagatcacccatgactccaaagagaggccagacacagttaaa
cagaagaatgccttcccgccaaacttcatccactctctggactccacacacatgatgctg
acctctctctactgctatagcgctggtttgacattcgtctcagtccacgactgtttctgg
acacacgccctcaccgtggacaccatgaacaaggtctgtcgggaacagtttgtcgcactg
cacagccagccaatccttcaagagctgtccaacttcctgctacagaaatactgcaccggg
ctcgcggctgatgccaagaacaagaaataccaggagtacaggaggctggtgctgctgctg
gccaaagtgccccagacaggtgattttgatctccagcaggtgaaaaaatccacttatttc
ttcagctga
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