Scomber scombrus (Atlantic mackerel): 133984474
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Entry
133984474 CDS
T10651
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:
ssco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133984474 (ddx10)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
90S particles
Helicases
133984474 (ddx10)
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GFIT
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NCBI-GeneID:
133984474
NCBI-ProteinID:
XP_062279804
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Position
8:2257920..2262133
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AA seq
850 aa
AA seq
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MMEKKPSNSAGKKPKPAKLKGSSDPVKDFEKWKKKYNKTKAKVKKSRAQIHKPQWQVERE
DIERLVSRYSLINSKEAIKFSDFPISKKTLQALQACQYRQPTEIQRQTLASALQGKDVLG
AAKTGSGKTLAFLIPVLECLYRQQWSSMDGLGALIISPTRELAYQTFEVLRKVGKNHEFS
AGLVIGGKDLKTEAEKIHRTNIVICTPGRLLQHMDETAAFHASDLHMLVLDEADRILDMG
FADTLNAIVENLPTTRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQS
YVVCELHQKVNMLFSFIRSHLKKKVIVFFACCKEVQYLFRIFCRLRPGMPILALHGKQQQ
MKRVEVYNDFLRKQNAVLFATDIAARGLDFPAVNWVLQYDCPEDADTYIHRVGRTARYKE
GGEALLLLLPSEEKGMVGQLQEKKVPINKIAVNPEKLQSVQQKLEAFLAQEKDQKERAQR
CFVSYLRSVYLMKNKDVFDVFKVKLHEYAVSLGLAVAPRVRFLNKAQAQRGEKVEQQEEE
RSEEEQELKSFKSQLRGERPQQESQSSESEDSDDDDDEEEEEEEQSKTQLLGPSDSEDDD
DLRDVDLLTVKRKDVFNLTGGEEMPEEEEEEEEDIKRTEKETKFTEAKKVLKRNFQVNTK
VTFSEKGDAVQLWPPVQRSATGKKADEEEEEEVSGINVEKARERLKREDQEFDKQEYRRK
VKAKHTEKRLKEKAARREASKQHKQKSDEEEEDEVVAYLANSSEDEFDPSTLPDPDKQRS
EEEEEEEEVDEARLGKRHHSSESSDEEEETLPAGKRKKVRQQDDEHTALDTGLSLAEDEE
LVLQLLGGRR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaaaaaaccctccaactctgctggtaagaaacccaaacccgctaagctgaaa
ggctcctctgatcccgtcaaagactttgagaaatggaagaaaaaatacaacaagaccaaa
gctaaagtgaagaaaagcagagcgcagattcacaaaccgcaatggcaggtagagcgcgag
gacatcgagaggctcgtgagcaggtactcactcatcaacagcaaagaagccatcaagttt
tcagacttccccatctctaagaaaaccctgcaggcgctacaagcgtgtcagtacagacag
cccactgagatccagaggcagaccctggcctccgccctgcaggggaaggatgtgctggga
gcggctaagaccggctcagggaagactctagccttcctgatccctgtgttggagtgtctg
taccggcagcagtggagctccatggacggcctcggtgctctcatcatctccccaaccaga
gagctcgcctaccagacctttgaagtcctccgtaaggtgggtaagaaccacgagttctct
gcaggactggtgatcggtggcaaggatctgaagacagaggcagagaagatccaccgcacc
aacatagtcatctgcaccccgggccgcctgctgcagcacatggatgagacagccgccttc
cacgcctctgacctccacatgctggtgctggatgaagcagatcgcatcctagacatgggc
ttcgccgatacgctcaacgccatcgtggagaacctccctaccacacgacagacgctgctg
ttctccgccacgcagaccaagtctgtcaaagacctggctcgactcagcctcaaagaccca
gagtatgtgtgggttcacgagaaggccaaattcagcacccctgccaccctggagcagagc
tacgtggtgtgtgagctccatcagaaggtcaacatgctcttctccttcatcaggagccac
ctgaagaagaaggtgatagtcttcttcgcctgctgtaaggaggtgcagtatcttttccga
atcttttgccgcctcaggcccggcatgcccatcctggccctgcacggcaagcagcagcag
atgaagagggtggaggtctacaacgacttcctcagaaagcagaacgccgtgctgttcgcc
acagacatcgcagccagaggtctggacttccccgccgttaactgggtgctgcagtacgac
tgtcccgaggacgcagacacctacatccacagggtggggaggacagccaggtacaaggag
gggggagaggccctgctgctgctgctgccctctgaggagaagggcatggtcggccagctg
caggagaagaaggtgcccatcaataagatcgcggtgaacccggagaagctgcagagcgtt
cagcagaagctggaggccttcctggctcaggagaaggatcagaaggagcgagcccagaga
tgttttgtctcctacctgcgctccgtctacctgatgaagaacaaagacgtatttgatgtc
tttaaggtgaaactccacgagtacgccgtctctctgggtctggccgtggcccccagagtg
cgcttcttaaacaaagctcaggcacagaggggtgagaaggtagagcagcaagaggaggag
cggtccgaggaggagcaggagctgaagagctttaagtcccagctgagaggagagcgtcct
caacaggagagccagagctcagagtcagaagattcagatgatgatgatgatgaggaggag
gaagaggaggagcagtccaagacacagctgctaggtccaagtgacagtgaggatgatgat
gatctaagagacgtggacctgctgacggtgaaaagaaaggacgtctttaatctgacaggg
ggagaggagatgcctgaggaagaggaagaggaggaggaggacataaagagaacagaaaaa
gagacaaagttcacagaggctaaaaaagtcctgaagagaaacttccaggtcaacaccaaa
gtgaccttcagcgaaaaaggagacgccgtgcagctatggccgccagtccagcgctcggca
accggcaaaaaggcggacgaggaggaggaggaggaggtttcaggtatcaatgtggagaag
gctcgggagaggctgaaacgagaagaccaggagtttgataagcaggagtaccgccgcaag
gtgaaggccaaacacacggagaagaggctgaaggagaaggcagccaggagggaggcgagc
aagcagcacaagcagaaatctgacgaagaggaggaggacgaggtggtggcgtacctggcc
aatagcagcgaagacgagtttgaccccagcaccctgccggaccctgacaaacagcggtct
gaggaagaggaggaggaggaggaggtggatgaagccaggttaggtaaacgacaccacagc
agcgaaagcagcgatgaggaagaggaaacgctcccagcagggaagaggaagaaagtcaga
cagcaggatgatgagcacacagctctggacactggtctctctctggctgaggacgaggag
ttagtcttacagctgctaggaggacgaaggtag
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