KEGG   Scomber scombrus (Atlantic mackerel): 133984515
Entry
133984515         CDS       T10651                                 
Name
(RefSeq) ras-related protein Rab-8B
  KO
K07902  Ras-related protein Rab-8B
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    133984515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    133984515
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssco04147]
    133984515
   04031 GTP-binding proteins [BR:ssco04031]
    133984515
Membrane trafficking [BR:ssco04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    133984515
 Autophagy
  Xenophagy
   Other xenophagy associated proteins
    133984515
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133984515
  Exosomal proteins of other body fluids (saliva and urine)
   133984515
  Exosomal proteins of colorectal cancer cells
   133984515
GTP-binding proteins [BR:ssco04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    133984515
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase SRPRB Septin DUF3963 PduV-EutP AAA_24 AAA_7
Other DBs
NCBI-GeneID: 133984515
NCBI-ProteinID: XP_062279909
LinkDB
Position
1:37688483..37703521
AA seq 206 aa
MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ
IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASSDVERMVLG
NKCDMNDKRQVSKERGEKLAIDFGIKFLETSAKSSINVEEAFMTLGRDIMSRLSRKMSDN
NPSGGGGPVKITESRSKKSFFRCLLL
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgaagacgtacgactatctgttcaagctgctgctgatcggtgacagcggagtcggt
aaaacctgcctgctgttccggttcagcgaggacgcgttcaacaccaccttcatctctact
ataggaatcgattttaaaatccgaacgatcgagttggacggaaagaaaatcaaactgcag
atttgggacacggcgggtcaggagaggttcaggaccatcaccaccgcttattaccgagga
gccatgggcatcatgctggtttatgacatcaccaacgagaaatccttcgacaacatcagg
aactggatccgcaacatcgaggagcatgcgtcctcagatgtggagcggatggttctggga
aacaaatgtgacatgaacgacaagagacaagtgtccaaagagagaggagagaagctggcg
atcgacttcgggatcaagttcctggaaacgagcgcgaagtcgagcatcaacgtggaggaa
gccttcatgactctgggaagagacatcatgagcagactcagcaggaagatgagcgacaac
aatccgtctggaggaggcggaccggttaaaatcacagagtctcgctccaagaaaagcttc
ttcaggtgtttgctgctgtag

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