Scomber scombrus (Atlantic mackerel): 133984551
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Entry
133984551 CDS
T10651
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18
KO
K21066
A-kinase anchor protein 18
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04530
Tight junction
Brite
Membrane trafficking [BR:
ssco04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133984551 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
YwqH-like
PHD
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
133984551
NCBI-ProteinID:
XP_062279941
LinkDB
All DBs
Position
8:16234739..16273053
Genome browser
AA seq
1449 aa
AA seq
DB search
MEMEKAVTGSEGEQEQTTMDSDGEQDLDSFPILVRSMSTSRRHSWGVPLSPINLGRRLSL
DTMAMDSDGEREDDDEERQNSLFRSTQEQSNSQTACPGDEPDGSKLRVSCHRARVTSMAD
GVPGRHLYSRSEILATDECSRAAHISRVVQTSKQAARAAGAEEFDPEENLHSTEGQSHIA
KQRNNKSETKAIGSVTWYEFLSKENDEEDDRLEKVEKGTKVKRTLSSLRNRMTGSFNKEK
GKNREKELQKEKGKEKEAREKEKVCSNSHNLVPGFFSSCATCSLCSKTLQKKHSMQCTNC
AVNVHKSCKSLLGDCTSSRNKRDSIQRTGPSGSPNLALKDRDREREHSGTASSQFLDGYS
SVLSVPGMTISPRGPNTQPTAAHTTNTTATSAHSLGHSLHHHSSSGFLPGEMDETDALRS
KRCNEDAISLAPSTTESIIVEDAHHAAVRSDLESDAQDLEAESWSLAVDQQYVKKHSKET
VKRQDVIYELMQTEMHHVRTLKIMLHVYVRELRENLQMDSSRLDCLFPRLENLLELHTHF
LSRLKERRRENLVSPTDRNYIINRVADILITQFSGEIGERMKDYYGDFCSHHTEAVSYYK
EQLQNNKRFQIIIRKINNLSIVRRLGVTECILLVTQRITKYPVLVERILHNTEVGTEEHE
ELTRALGLIKATISQVDALVNLHEKTSRLRDIHNKMEPKALGKIKDGRVFRREDLAQGRR
RLLHEGTVNWKAASGRLKDILAVLLSDVLLLLQEKDQRYAFATVDNKPSAISLQKLIVRE
VAHEEKAMFLICASSNEPEMYEIHTYSKEERNTWMTQIRQAVESCPNTEERFVSEEEEAR
ASRFKEFQERLSQKDTVIVQALTEKLQLFADMAESVAGLEDTGSRSRLLLRGEASELQQG
ETLLKGAITDVENLQNLLQSGVREETPTSRLDEGSGSGVLPRRADTFGGYDSSPTILSKN
GSVKKNFSGESRNKDRSQRASSDPQLKDLSGSHTLEQTVDESCCSPARWNCIWSNSFPEA
EFFDRVLMLSQRLYSLQAIISQQDSQIELQRASMIERASLPGRHRGNVLLEQEKQRTLAL
QREELASFHKLQSQHRQEQHRWERERERHRHQVETTEARLRLREDECRRLEERLAEEKVE
LERQRETYQQDLERLRESTRAVEKEKERLEHQKKIKRKTIEVAPLSGSLNGEPLTSSSST
SVSDLPLKPLVRASLSVAPADYPERPELMLRREAGSSTQPLKTEVPLHLFSATNQQHKLV
GVQQQIPTKLAAFSSGKGKGGKTGKASHRTDSTASVDMKQMLPLKLSARDDNTLKAKRSI
SPHQQLPLSTPPQPHSHHHHTDQLSPPDNAGPDGQSTSTISTSHPNAQKPPMPPAQSHPQ
PAMQPPTMPLHLQSTGPVQFQPHLPPQSLSPNAQANVQMNVQGLTHSHSMPPPYKITTED
LNKEDVIFF
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagaaagcggtaacaggatcagaaggggaacaggagcaaaccactatggat
tctgatggagagcaagacctggacagctttcctattctggttagatcgatgtcaacatct
cgaaggcacagctggggtgtccctctgtctcccattaacctggggaggagactgagcctg
gataccatggccatggacagcgatggagagagagaggatgatgatgaggagagacagaat
agtctcttccggtccacccaggagcagagtaacagccagacagcctgtcctggggatgag
ccagatggttccaagctgagggtctcctgtcacagagccagggtcaccagcatggctgat
ggtgttcctggcaggcatctgtactcccgctcggagattcttgcaacagacgaatgttcc
cgtgctgcacacatctctcgtgttgtacagacatccaaacaggccgcaagggcagcagga
gcagaggagttcgaccctgaggaaaacttacattctactgaaggacagagccacatagcg
aagcagaggaacaacaaatcagagaccaaagcgattggaagtgtcacttggtatgagttc
ctctctaaagagaatgacgaagaggatgatcgtttagagaaggtggagaaaggtaccaag
gtaaagagaactctcagctctctgaggaaccggatgacgggctccttcaacaaagagaag
ggtaagaaccgagaaaaagagctgcagaaagagaaggggaaggaaaaggaggccagagag
aaagagaaagtgtgcagtaacagccataatttggtgccaggctttttctccagctgtgca
acctgctcactgtgcagcaagaccttgcagaaaaagcacagcatgcagtgcacgaattgt
gctgtgaacgttcacaagagctgcaagtctctgttgggtgactgcaccagcagcaggaat
aagagagattccatacagaggacgggcccatctggatctcctaaccttgcgctaaaagac
cgagacagagagcgggagcattcaggcacagcctcatcacagttcctggatggatactca
agtgttctcagcgtcccaggcatgaccattagtccgcggggaccaaacactcagcctact
gccgcccataccaccaacactactgcaacctctgcccacagtcttggccacagcctccat
caccacagtagctcaggattcctccctggggagatggatgagaccgatgctctccgctcc
aaacgctgcaatgaagacgccatttccctcgctccctccaccaccgagtctatcatcgta
gaagatgctcaccatgcagcagtgcggtctgatctggagtctgatgcccaggacctggag
gcagagtcttggagtttggcagttgaccagcagtatgttaagaagcactctaaagaaaca
gtgaagagacaggacgtgatatatgagctgatgcagacggagatgcatcatgtgcggaca
ctgaagataatgctgcatgtttacgttcgagagctgagggagaacctccagatggactcg
agtaggctggactgtctgttcccccgcttggaaaacctcctggagcttcacacacatttc
ctgtctcgtctcaaagaacgccggcgagaaaaccttgtttcacccaccgacaggaactac
attatcaacagagtggcagacatactgattacacagttctcaggtgaaataggagagagg
atgaaggactactatggagatttctgcagtcaccacactgaggctgtcagctactacaaa
gaacagctgcaaaacaacaaaaggttccaaatcatcatacggaaaatcaataacctgtcc
attgtgcggaggttaggagtgactgagtgcattctgttggtgacacagcgcattacgaag
tatccagtactagtggagcgcattctgcacaacactgaagtgggtacggaagaacatgaa
gagctgactcgggcactgggtctcattaaagccacaattagtcaggtggatgcgctggtt
aatctccatgagaagacatctcggcttcgagacatacacaacaagatggagccaaaggca
ttgggaaaaatcaaagatggccgagtgtttcgcagggaggacctggcacagggcaggaga
cggctgctgcatgaaggcacagtcaactggaaagctgcctctggcaggctcaaagatatt
cttgcagtcctcctctctgacgttttactcctgctacaagagaaggaccagagatatgca
tttgctacagtggataacaagccgtcagcgatctctctgcagaagctgattgtcagggaa
gtggctcatgaggagaaagctatgtttcttatttgtgcttcctccaatgagccagagatg
tacgagatccacacctattccaaggaggaacgaaacacatggatgacacaaatacggcaa
gctgttgaaagctgtcctaatacagaagagaggtttgtcagcgaggaggaagaggcacgg
gcttcccggttcaaagaatttcaagaacgtctgagccagaaggatacagtaatcgtccag
gctcttactgagaagctgcagttgtttgcagacatggcagaatctgtggcaggtctggag
gacacaggttctcggtccagactacttctgcgaggagaagcctcagaactccagcagggg
gagaccctgctcaaaggagcaatcactgatgttgaaaacctccagaacttgctgcagtct
ggagtgagagaggaaactccaacctcacggctggatgaagggagcggctctggagttctg
cccaggagagcagacacctttgggggctatgacagcagccccaccatcctcagtaagaat
ggcagtgtcaagaagaacttttctggcgagtcgagaaacaaagacagaagccagagagcc
agctccgaccctcagctcaaagacctctctggcagccacactctggagcagacggttgat
gaaagttgctgctctcctgccagatggaactgcatttggtccaactccttccccgaggct
gagttcttcgacagagtgctgatgctctcccagaggctctacagtctgcaggccatcata
tcacagcaggacagccaaattgagctgcagcgagcctcaatgatagagcgggcctccctg
cctggacgccacagaggcaacgtgctcctggagcaggaaaaacagcggactctggccctg
cagagagaggaactagccagcttccacaagctgcagtctcagcaccggcaggaacagcat
cgctgggagagggagcgggagaggcaccgccaccaagtggagaccacagaggccagactc
cgactaagggaggatgagtgcaggcggctggaggagcgtctggcagaagagaaggtggag
ctggagaggcagagggagacataccagcaggacctggagaggctacgagagtccaccaga
gctgtggagaaagagaaggaacgcctggagcaccagaagaagatcaagaggaaaaccatt
gaggtggctcctctgtctggcagcctgaacggggagcccctcacgtcctccagctccact
agcgtgtccgacttgcccctgaagcctctggtgcgtgccagcttatctgttgcaccagct
gactacccagagcgccccgaattgatgttgcgacgggaggcgggctcttccacccagcca
ctaaagacagaggtgccgctccatctcttcagcgccaccaaccagcagcataagctggtt
ggggtgcagcagcagatccccaccaagctggcggccttcagtagcggcaaagggaaagga
ggcaagactggcaaagcctcacatcgcactgacagcactgcctcagtggatatgaagcag
atgctgccactgaagctgtccgcccgagatgacaacaccctcaaggccaagcgctctatc
agcccccaccagcagctcccgctgtcaacccctcctcagcctcactcccatcatcaccac
acagatcaactaagtcctccagacaatgctggaccagacggccaatccacatccaccatc
agcacctcccaccccaatgctcagaagccccccatgccccctgcacagtcccatcctcag
cctgccatgcaacctcccaccatgcctctccacttgcagagcacaggacctgtccagttc
cagccccatctgccgccgcagagcctcagtcccaacgcccaggccaatgtccagatgaac
gttcaggggctcacacacagccacagcatgccgccgccctataagatcaccactgaagac
ctcaataaggaggacgtcatcttcttctaa
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