Scomber scombrus (Atlantic mackerel): 133984560
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Entry
133984560 CDS
T10651
Symbol
lrrc8c
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133984560 (lrrc8c)
Ion channels [BR:
ssco04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
133984560 (lrrc8c)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_At5g56370
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
133984560
NCBI-ProteinID:
XP_062279950
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Position
8:complement(6100378..6109707)
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AA seq
789 aa
AA seq
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MIPVMEFRQFSEQQPAFRVLKPWWDVFTDYLSVIMLMIGVFGCTLQVMQDKIICLPQKTS
VNTNEVETTSLLHLQPNTSAVPREMKGLKTNLDLQQYSFINQMCYEMALHWYAKYFPYLV
LIHTLVFMVCSNFWFKFPGSSSKIEHFISMLGKCFDSPWTTRALSEVSGENPEEKDHKKT
TRSNIAVAPGEGSLEKTQSLRSIPEKIVVDKPSASALDKKEGEQAKALFEKVKKFRLHVE
EGDILYIMYVRQTVFKVFKFLLIIAYNSALVNKVRNRVRCEVEIQNMTGYKDFQCNHTMA
HLFSKLSYCYLCLVAVYGFTSLYTSYWLFYRSLKEYSFEYVRQETGINDIPDVKNDFAFM
LHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNHDWTAEKLRQRLQTNGNNRLELQLFML
PGLPDTVFELTELQSLKLEIINNVTIPASISQLEDLQELSLYQSSLKLHTTATSFLKENL
KVLRVKFDDSREFPNWMYGLRNIEELYLTGSLCPDAKNIVLESLREMKCLKTLSLKSNLT
KIPQSIVDVSSHLQRLYLHNDGTKLVMLNNLKKMNNLTELELVRCDLERIPHAIFSLTNL
QELDLKENNLRSIEEIISFQHLRKLICLKLWYNGIMYIPEHIKKLGSLERLYFSNNKIEI
LPSHLFLCNKLRYLDMSNNDIRFIPPEIGVLQSLQYFSVTCNKIENLPDELFFCKKLKTL
KLGKNSLSILSPKISYLVHLTHLELKSNHFEVLPPELGFCRALKRSGLAVEDTVFETLPS
DVRDQMKAE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtaatggaattccggcagttctctgaacagcagccagcgttcagagtgctg
aagccgtggtgggatgtgttcaccgactatctgtctgtaatcatgctcatgatcggcgtc
ttcggatgcactcttcaggtaatgcaagacaaaatcatatgccttcctcagaaaacatca
gtgaacacaaatgaagtggaaacgacgtcattgttacacctgcaacccaatacttcagct
gtaccgagagaaatgaagggcctgaaaaccaacctggatcttcaacagtacagtttcatc
aatcagatgtgttatgagatggctctgcattggtatgccaagtactttccttatttggtt
cttatacacaccctagttttcatggtgtgtagcaacttctggttcaaatttcctggctcg
agctctaaaatagagcattttatctccatgcttggcaagtgctttgactctccgtggact
acacgagctctgtcggaagtctctggggagaatcctgaagaaaaggaccataaaaagact
actaggtccaacattgctgtggcccctggagagggcagtttggagaagacacagtccctt
cggtctatcccggaaaagattgtagttgacaagccgtcagcaagtgctcttgacaaaaaa
gagggggaacaagctaaagcactttttgaaaaggtaaagaagttccgtttgcatgttgag
gagggagatatcctctacatcatgtatgttcgccagacagtgttcaaggtgtttaaattc
ctcctcatcattgcatataatagtgccctggtgaataaggtgcggaatagagtacgttgt
gaagttgagatacagaacatgaccggctacaaagactttcaatgtaatcacactatggct
catctgttttccaagctttcgtactgctacctgtgtttagttgctgtctatggatttaca
agcctttacacctcctactggttgttttaccgctcactgaaagagtactcctttgagtat
gtgcgacaagaaacaggcatcaatgacatcccagacgtcaagaatgactttgccttcatg
ctacacatgattgatcagtatgacccactttattcgaaaagatttgccgtttttctttcc
gaggtcagtgagaacaaactgaaacagctcaacctaaaccacgattggactgcagagaaa
ctgcgtcagagactccagaccaatggcaacaacaggcttgaacttcagctgttcatgctc
cctgggttaccagacactgtctttgagttaacagagctccagtctcttaaactcgaaatc
atcaacaatgtcaccatccctgcctcaatctctcagctggaagaccttcaggagctgtct
ctttaccaaagctctctaaagttgcacacaacagctacctccttcctcaaagagaacctt
aaagtgcttcgcgtgaagtttgatgatagcagggaatttccaaactggatgtacggcctg
cgaaatatagaggagctctatctcacaggatcactatgccctgatgccaagaatatagtt
cttgagtcattgcgggagatgaagtgtttgaaaactctctcccttaagagtaatttgacc
aagataccgcagtccatagtggatgtttccagccatctgcagaggctgtacttacacaat
gatggcactaagctagtaatgctcaataacctgaaaaaaatgaacaatctgacagagctg
gagctagtgcgctgtgatctggaacgtattccacatgcaatcttcagcctcacgaacctg
caggagctcgacctgaaagagaacaaccttcgctctatagaggagatcatcagcttccag
catcttcgaaaacttatttgccttaaactttggtacaatggcatcatgtatatcccagag
catatcaaaaagcttggcagcctagagcgcctctacttcagcaacaacaagattgagata
ttgccttcgcacctgttcttgtgcaacaagctgcgctaccttgacatgtccaacaatgac
atccgattcatccctccagaaatcggagtccttcagagtctacaatatttctctgtcacc
tgtaacaaaattgaaaatctacctgatgagctcttcttttgcaagaagctcaaaacgcta
aagcttggcaagaactcgctgtccatcctctcaccaaagatttcctacctagttcatctg
acacacttggagctcaaaagcaaccactttgaggtcctgccaccagagctgggtttttgt
cgtgctttgaagcgcagtggccttgcagtggaagacacagtctttgaaactctgccttca
gatgtcagggaccaaatgaaggctgagtga
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