Scomber scombrus (Atlantic mackerel): 133984583
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Entry
133984583 CDS
T10651
Symbol
kdr
Name
(RefSeq) vascular endothelial growth factor receptor 2 isoform X1
KO
K05098
kinase insert domain protein receptor [EC:
2.7.10.1
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04020
Calcium signaling pathway
ssco04370
VEGF signaling pathway
ssco04510
Focal adhesion
ssco04517
IgSF CAM signaling
ssco04518
Integrin signaling
ssco04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133984583 (kdr)
04370 VEGF signaling pathway
133984583 (kdr)
04020 Calcium signaling pathway
133984583 (kdr)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133984583 (kdr)
04518 Integrin signaling
133984583 (kdr)
04519 Cadherin signaling
133984583 (kdr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133984583 (kdr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssco01001
]
133984583 (kdr)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssco04090
]
133984583 (kdr)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
133984583 (kdr)
Protein kinases [BR:
ssco01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
133984583 (kdr)
CD molecules [BR:
ssco04090
]
Proteins
133984583 (kdr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
ig
VEGFR-1-like_Ig-like
VEGFR-2_TMD
V-set
Ig_PDGFR_d4
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
133984583
NCBI-ProteinID:
XP_062279986
LinkDB
All DBs
Position
8:complement(9019313..9035505)
Genome browser
AA seq
1349 aa
AA seq
DB search
MMALAVSVIPLLGIILEISCVAATGLRFMPDPPVLNIHGIHRMNKSDNLELTCRGRQHLI
WSTPPTSTRFSRSDCSGSGLFCETLQITNATVNETGNYQCAYRDLKVEDGKTAASAYVFV
HDYKVPFVPSDKEYEVVFIHEGERVVIPCRGSVENLNVTLHTKYPNKELHPDGKDSVWDA
RTGFTIPSYLISYAGVVSCQTHIGNETFKSSLYIVAVVGYKIYGLELTPKEVKLSVGERL
MLSCTATTELNVGIEFNWTHSGQALTSANGSRLTHATPHKKKLWASLELSNTLIVENVTV
DHRGEYTCTASSGKMEKSKTAHLTVYEKPFIDLQEPSTKVWEFRVGELTFATIPVKYSAY
PEPTFRWLKNGLPLKDNYRVRGRNDSLIIRGIAETDAGNYTMVLTNKITREEQRHTIQLL
VKVPPHIIEKEVAPDTDVYPYGSSPILRCTVRGIPIPAYIEWQWMSKEDCPTAFLSGLTK
SEAQLEGCTDWRNITNGTGPNTIERIFTDIDHSQKKIMSSLKIQKAKAQVLYRCTARNKV
SEDSRVIFFHVTRGLELSISPSNEPLEEDHVVLRCKADKLIYGNLAWFRVLKSDHVPSVQ
PCRSLTLQRRPLEQAVVSTVQGNNVTLELPLPNASRQDEGLYACQVENIKTKERTCLIRR
LSLRGLEAARILNNITDQKVNVSATITLHCDAAGTPNPTVVWTKNNHTVVDGSGVILSQE
NRVLMIQRVKKEDGGLYTCTACNSRGCDTSQAFLTTEGAEEKTNVELIVPIGSVVIAMFF
WLLIVFVIRGRKRPNGGDLKTGYLSMILDSEDMPMDEQCERLTYDANKWEFPRDRLKLGE
PLGRGAFGQVVEAAAFGIEKATTCTTVAVKMLKEGATSSEYRALMSELKILIHIGHHLNV
VNLLGACTKPGGPLMVIVEYCKHGNLSSYLKSKRGEYSPYKRKRVDSQKWASGEEDVTEG
DLGLGKIAQLDICTGTAVCSRAGDKASGSSVDTQEESSDQDHLTMEDLICYSFQVAKGME
FLSSRKCIHRDLAARNILLSENNVVKICDFGLARDVYKDPDYVRKGDARLPLKWMAPETI
FDRVYTTQSDVWSFGVLLWEIFSLGASPYPGVCIDESFCRRLKEGTRMRPPEYATNEIYQ
TMLDCWLDRPTDRPTFAELVEHLGNLLQASAQQDGKDYIPLTPSSATEGPPVSPDPRVPY
SRPQSGELLEAQLHYDNAPSLGVSQQSERCSRPLSVKTFEDIPVEHSSVMEGHTDSGVCF
SPGEVKGLNQLPTTPNFSQLLRCKSKESLASESSNQTSGYQSGYHSDDTDTPIYANEEMI
MKHNMLKKPPLPKTPEKFNAEIRYSTPPV
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctggcagtctccgtcattccacttcttggcattattctggaaatcagttgt
gttgctgccactggactgaggtttatgcctgatccaccagtgctgaacatccatggaatc
cacaggatgaacaaatctgacaacttggaacttacatgcagaggtcgccagcacctgata
tggtcaactcctcctacaagcactcgcttctccaggagcgactgcagtggatcaggactc
ttctgcgaaacactgcagatcaccaacgcaactgtcaatgaaactggaaattatcagtgt
gcctacagagacctcaaagttgaagatggcaagactgcagcatctgcatacgtgtttgta
catgattacaaggtgccatttgtgccatctgataaagaatatgaggtggtcttcatccat
gaaggagagcgggtggtcataccgtgcagaggctcggtggaaaatctcaatgttacgctc
cacactaagtatccaaataaggagcttcatcccgatgggaaggattctgtatgggacgcc
aggacaggtttcactattcccagctatctgatcagctacgctggcgttgtgtcctgccag
actcatattgggaatgagacgttcaagtcctctctgtacatcgtcgctgttgttggatac
aagatctatggcctcgaactgacccccaaagaagtcaagctgtctgtgggggagcgactg
atgctcagctgcactgccaccactgagctcaatgtgggcatcgagtttaactggacgcac
tctggccaggccctgacctcggcaaacggttcgaggctgacccacgcgacaccccataag
aagaagctgtgggcttctctggagctgtccaacacgctcatagtggagaatgtgacggtc
gatcacaggggagaatacacctgcactgcatccagtgggaagatggagaaaagtaagaca
gcacatcttacagtttacgaaaagcctttcattgatttgcaggagccatcgacaaaggtt
tgggagttccgagtgggagaactgacatttgccaccatccctgtgaagtactcagcctat
cctgagcccacctttagatggttaaaaaatggccttccactgaaggataactacagggtc
agagggagaaatgattccctcatcatccgtgggatcgcagaaacggatgcaggaaattat
acaatggtcctgaccaataagatcactagagaggagcagagacataccatacagctgcta
gttaaagttcctcctcatatcattgagaaggaggtggcaccggacactgatgtatacccg
tatggcagcagccccatcctgaggtgcaccgtccgtggaattcccatacctgcatacata
gagtggcagtggatgtccaaagaggattgtccgacagcctttctgtcaggtctgacgaag
tctgaggctcagctagaaggctgtacagattggagaaatatcactaatggcactggtcca
aacactatagagcggattttcacggacatcgatcattcccaaaagaaaattatgagctct
ttgaagattcagaaagccaaggcccaggtcctctacaggtgcacggctcgcaacaaagtg
tcagaggattcacgcgtcatctttttccatgtgacacgtggcctcgagctgagtatatct
ccatccaatgagcctttggaggaggaccatgtggtcctgcggtgtaaggcggacaagctg
atctatggcaaccttgcgtggttccgtgtgttgaaatcggatcacgtcccgtcagtgcag
ccctgtcgctccttgacactgcagcggaggcccctggagcaagccgtggtctccactgtg
cagggtaacaacgtgaccctggagctgccactgcccaatgcatcccgccaggatgagggt
ctgtatgcctgtcaggtggaaaacataaagactaaggagagaacctgtctgatacgccgt
ctttctctcagaggtctcgaggctgcgaggatccttaacaatataaccgaccagaaagtt
aacgtgagtgcaacgatcactctccactgtgatgctgctgggacaccaaacccaacggtg
gtatggaccaaaaacaaccacactgtggtggatggctcaggtgtgattctgagccaggaa
aaccgtgttttgatgattcagcgagtgaagaaggaggacggtggtctgtacacctgcacc
gcatgtaacagccgtggttgtgacacctcacaggcctttttgactactgaaggtgcagaa
gaaaagaccaacgtggagctgattgttcctattgggtcagtggtcatcgccatgtttttc
tggctactgatcgtctttgtcatccgtggaagaaagagaccaaatggtggagatctgaag
acgggctacctgtccatgatcctggactcagaggacatgcccatggacgagcagtgtgaa
aggctcacctatgatgctaataaatgggagttccctcgggacagactaaagctaggtgaa
ccactgggacgtggagcgtttggtcaggttgtagaggcggccgccttcggcatcgagaaa
gccaccacatgcaccactgttgctgtcaagatgcttaaggagggagccacatcaagtgag
taccgcgccttgatgtcagagctgaaaatcctcatccatatcggacatcatctcaatgtt
gtcaacctgctgggagcctgtacaaagcctggagggccactgatggtgattgtggaatat
tgtaaacatggaaacctctccagctacctaaaaagcaagcgtggagagtacagcccctac
aagaggaagcgagtggatagccaaaagtgggcatctggcgaggaggatgtgactgaaggg
gatctgggtctggggaagattgcccagttggacatctgcacaggaacggctgtctgctcc
agagctggggacaaggcttcgggcagcagcgtggacactcaggaagagagctcagaccaa
gaccatctgaccatggaggacctgatctgctacagcttccaggtggccaaaggcatggag
tttctgtcctctcgcaagtgtatccacagggatctagcagccaggaacatcctgctttca
gagaacaatgtggtgaagatctgcgactttggcctcgctagagatgtctacaaagaccct
gactatgtccgcaagggagatgctcgtctgcctctgaagtggatggctcctgagaccatc
ttcgaccgggtgtacactacacaaagcgatgtttggtccttcggggtcctcctctgggag
atcttttctttgggggcttctccctacccgggcgtttgcatcgatgagtctttctgcagg
aggcttaaggaaggcacaaggatgagacctccagagtacgccaccaatgagatataccag
accatgttggactgttggctggatcgtcccacagacaggccgacatttgctgaactggtt
gaacatttgggcaacttgctacaggccagtgctcaacaggatgggaaggactacatcccc
ctgaccccaagcagtgcgacagaaggacctccagtgagccctgaccccagggtcccctac
agcaggccccaaagtggagaactcctagaagctcagcttcactatgacaatgcaccgtct
ctcggtgtgtcccaacagagtgaacggtgcagcaggcccctcagtgtgaagacatttgag
gacatccctgtggagcacagtagtgtcatggagggtcacacagacagtggagtgtgcttt
tcaccaggggaggtgaagggtttgaatcagctgccaactacgcccaactttagccagcta
ctgcgctgtaagagcaaagagtctctggcctcggaatcgtccaatcagacgagcggatac
cagtcagggtaccactctgacgacacagacactccgatctacgctaacgaggagatgatc
atgaagcacaacatgctgaagaagcctccgctgcccaagacgcctgaaaagttcaacgcg
gagatccgttatagcacgccacctgtctga
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integrated database retrieval system
