Scomber scombrus (Atlantic mackerel): 133984584
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Entry
133984584 CDS
T10651
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133984584 (trappc8)
Membrane trafficking [BR:
ssco04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
133984584 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_3rd
Ig_TPPC8_4th
Ig_TPPC8_C
Ig_TPPC8_2nd
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
133984584
NCBI-ProteinID:
XP_062279988
LinkDB
All DBs
Position
8:complement(619547..687037)
Genome browser
AA seq
1490 aa
AA seq
DB search
MAQCVQSVLEFVQDSFVPMVSVLCSEEAERVTRKNNLNFVELLRPFCRLTSDGHIRDPNN
QVQAVKNLRICVNNVVTSPSTMSASLSPAQRRLLNEVVLSCQPQENSVANVITAGDNDLH
FSDHSVKASTPWYSAWRKTLLEVSTSKHYTATTPWFEAYRENFLQSMPASDHEFLNHYLA
CMLVVSSTEAVPVEQFLKLSQEQHRIQHSGEYTTPKWFIPNTLKYYVLLHDMTEGDEQRA
DTVYEDMKQRYGPQGCYLLKMNSRTFSAEEDEQIPDPWSQYLHKNNLHNQDMLDDLAPNL
NSSAVENDVSAAEVDHHHLTKKDGVFNSLENHPLQLDSVSSSGSLHTLGAVNTDPKKGVR
DPENVVGGAGSHGACLTLNDHDHIRQFIQEFTFRGLLPHIEKNIRQLNDQLVSRKGLSRS
LFTATKKWFGGGKVPEKSISEPKSTCGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYH
TAKKDFLSDQAMLYAAGALEMAAVSAFLQAGAPRPYPAHYMDTAIQTYREVCKNMVLAER
CALLSAEILKSQGKYSEAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMLRKFAFHM
ILAGHRFSKAGQKKHALRCYCQAMQVYKGRGWSLAEDHINFTIGRQSFTLHQPENAVTAF
RQILTNDSKQTATQQGAFLREYLYVYKSVMGGNEVSLPQLPLPCIHSSATRVYFGHERCL
AEGEKQAATHVSLDQEYDLDLAAMWSNLEEQLVAAVNRGVVPGNFQPTQCCLNSQTDNLH
HPLAVVEEPIIVEVTFSNPLKVSLALSNLSLLWRFTADGVSPSQEKTTEEFSGETVTNEK
DTLAPGMTQKDEVVTTEIILEFHMGPEETKVARLRLLPHRTGQLNIVGVVYNLASASSGE
TPPSTEGQQTLDLMVVRGKQDLKIQGPRLNQTKEDKTLVRHGPDRRLDPIITPPMPLMEV
FFLQFPTALLCGEIRKAYVEFCNVSGVQLCGLRVASTHPDFFTFGSRATTPLTPLSPTSS
ENCSAYKTLATPPGAQPGSVVSEMLVSAEDFSQLSGVMEIPIDGSTLQPGESTQLPLWLR
GPDQEGVHEINFLFYYESSEKGIKISHRVLRHTVFICASRSLSVQASACRSSVSPHHGLD
DKGSSGTLVFIDVENINTSEAGVREFHIVQVSSSSQNWRLYKCINPGKDKDCKLTSRERA
KLCFKATRCKPHQATSDAVKKYTFADLNLGNERIISSATPCGDFFFRSCRPSVSQQVDVA
SARTSSSSKTQGSVPPMNRTSDITNMVKKCNELDLNIIIIWKAYVIEDNKQLILEGQLHV
ALQTIGKEASSLTSKEEAQEMVLFKFKSELPPPVVLPSAELSQLIKTNLHYPETYTHPFL
QNSLCVVPVTLTLSNCSLAQVDVVIDLRHKSTSPESLDVHSSFTWVGQTQYKLQLKPQEV
LCLTLQACFLQAGVYNLNTPRVFAKPAEQDSMCETSQQTASPALIIINNA
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatgtgttcagtctgtgctggagttcgtccaggactccttcgtcccgatggtg
tccgtcttgtgcagcgaagaagcggagagagtaacgcgcaagaacaacctgaatttcgtt
gaactgctgcggcctttctgcagactaacgtccgatggtcacatccgggatcccaacaac
caggtgcaagccgtcaagaacctgcgcatttgtgtcaataatgtggtgaccagcccaagc
acaatgtcggcttcactcagccccgcccagcgccgactgctcaatgaagtggtattatcc
tgccagccacaagagaatagtgtggccaacgtgatcacagcaggagacaatgaccttcac
ttcagtgatcactctgttaaagctagcaccccctggtacagtgcctggagaaaaacactg
ttggaagtcagcacctccaagcactacacagcaaccacaccctggtttgaagcctacagg
gagaacttcctgcagtcaatgcctgcctccgaccatgagttcctcaatcactacctcgcc
tgcatgctggtggtatcctccactgaggctgtccctgtggagcagttcctcaagctttcc
caggagcagcatcggattcagcacagtggagaatacactacccccaagtggtttatccca
aacacacttaagtactacgtcttactgcatgacatgactgaaggggatgaacagagggca
gatactgtgtatgaggatatgaaacaaaggtatggtcctcagggctgctatctgttgaaa
atgaactctcgtaccttctcagctgaagaagatgaacagattccagacccctggagtcag
tacctgcacaaaaataacctgcataaccaggatatgcttgatgatctagccccaaatctt
aacagttctgctgttgaaaatgatgtcagtgcagctgaagtggaccatcaccacttaaca
aagaaagatggagtgttcaacagcctggagaatcatcctctccagctggactcggtgagc
agctctgggagtctgcacacccttggtgctgtcaatactgacccgaagaaaggtgtaagg
gatcccgagaacgtggttgggggagcggggagccatggggcatgtctgacactgaatgac
catgaccacatcagacaattcattcaagaattcaccttcagaggcctgctgccacacata
gagaagaacatcagacagctcaatgaccagctggtctccagaaaaggtctaagtcggtct
cttttcactgcgaccaagaagtggtttggtggaggaaaggttccagagaagagcatcagt
gagccaaagagcacgtgtggccttctctatcccccagaagcccctgaactgcagatcagg
aagatggctgacctgtgcttcctggtccagcactatgaactggcctacagctgttatcac
actgccaagaaagactttctgtcagaccaggccatgctgtatgctgcaggggcattggaa
atggctgcagtgtcagcttttctgcaggctggagctccgagaccatatccagcacactac
atggacactgcaatacagacatacagagaagtctgcaagaacatggtgctggctgaacgc
tgtgctttactcagcgctgagatactcaagagtcaaggcaaatactcagaggctgcaact
ctccttattaaaatgaccagtgaggactctgacttacgcagtgctctgctgttggaacag
gccgcccactgcttcattaatatgcgtaatcccatgctgcgcaagtttgccttccatatg
atccttgctggtcatcgtttcagcaaagcaggacagaagaagcatgcactgcgctgttac
tgccaagccatgcaggtgtacaaggggaggggctggtctttggcagaggaccatatcaac
ttcacaattggtcgtcagtccttcacgcttcaccagccagagaacgctgtaacagctttc
agacagatcctgaccaatgacagcaagcagacagccacacagcagggtgcctttctcaga
gagtatctctatgtttacaagagtgttatgggaggaaatgaagtcagcctcccccagctg
cctctgccctgcatccacagctcagccacaagagtctactttggacatgaacgctgcctt
gcagagggtgaaaagcaggcagccacccatgtgtccctggaccaggagtatgacctggat
ttagcagccatgtggagcaatctagaggagcagcttgtggctgccgtcaaccggggggtc
gtcccaggaaatttccagcctacccagtgctgcctgaacagccagacagacaatctgcat
catccactggctgtggtggaagagccgatcatagtggaggtgacatttagtaaccctctt
aaggtttccctggcattgtccaacctctcactgctctggaggttcactgccgatggcgtg
tctccatctcaggagaagacgacagaagagttctcaggagagaccgtcaccaatgagaag
gataccctggctccagggatgacacagaaagatgaagttgtcaccactgagatcatcctg
gaatttcacatgggtccagaggagactaaagtggctcgactcaggctgctgccacacaga
actggtcagctgaacattgtgggtgtggtgtacaacctggcctcagcctcctctggagag
acgcctcccagcactgaaggccagcaaacattggatttgatggtggttcgtggtaaacag
gacctgaagattcagggcccacgacttaaccagacaaaagaggacaagacattggtacgg
catggacccgatcgacgtctggatccaatcataacaccacccatgcccctgatggaggtc
ttcttcctacagttcccgactgcgctgctgtgtggtgagatcaggaaggcatatgttgag
ttctgcaacgtcagtggtgttcagttgtgtggcctgcgagtggcgtccacacatcccgat
ttcttcacctttggcagtcgggccacaacacctctcacacccctcagcccaacctcatct
gaaaactgttctgcctataaaactttggccacaccccctggggcccagccaggctcagtg
gtgtctgagatgttggtttcagccgaggatttcagtcagctatctggtgtgatggaaatc
ccaatagatggcagcaccctgcaaccaggtgaatcaacccagctacccctctggctcaga
ggaccggatcaggagggagtccacgaaataaacttcctgttctattatgagagctcagag
aaaggaatcaaaatcagtcatcgggtgttacgtcacacagtgtttatctgtgccagccgt
tctctgagtgtgcaggcatcagcctgtcgcagcagtgtctctccacatcatggtctggat
gacaaaggcagcagtggaacgctggtctttattgatgtggagaacatcaatacgagtgaa
gctggtgtgcgtgagttccacattgtccaggtgtccagcagcagtcaaaattggcgcctc
tacaagtgtatcaacccaggcaaggataaagactgtaaactcaccagcagagagagagcc
aagttgtgtttcaaggccacacggtgcaaaccccaccaagccacctcggatgccgtaaaa
aaatacacctttgcagacctgaatcttggcaatgaacggatcatcagttcagccacaccc
tgtggagatttcttcttccgttcctgtcggccctcagtgtctcagcaagtagatgtggcc
tcagccaggacatcatccagcagcaagactcagggctctgtccctcctatgaatagaacc
tctgacatcaccaatatggtcaagaagtgtaatgagctggacctcaacataatcatcatc
tggaaggcctatgtgatcgaggacaacaaacagctgatccttgagggccaactccatgtg
gcgctgcaaaccatcggcaaagaggcgagttctctgacttccaaagaggaagctcaggag
atggtgctgttcaagtttaaatcagagctgcctcctccagtcgttctgccctctgcagaa
ctgtcccaacttatcaaaaccaacctgcactatccagagacctacacacatccgtttctc
cagaatagtctgtgtgtggtgccagttactctgactctgtcaaactgctccttggctcaa
gttgatgtcgtcattgacttgcggcacaaaagcaccagccctgagtccctggatgtccac
agctcgttcacttgggtgggtcagactcagtacaagctgcagctgaagcctcaggaagtg
ctgtgcctgactctgcaagcttgtttcctccaggcaggagtctacaaccttaacacgccg
cgagtcttcgccaaaccagctgaacaggactccatgtgtgagacgagtcagcagactgct
agtcctgctctcatcatcatcaacaatgcctga
DBGET
integrated database retrieval system
