Scomber scombrus (Atlantic mackerel): 133984614
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Entry
133984614 CDS
T10651
Symbol
gatad2ab
Name
(RefSeq) GATA zinc finger domain containing 2Ab isoform X1
KO
K23194
transcriptional repressor p66
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133984614 (gatad2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133984614 (gatad2ab)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133984614 (gatad2ab)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
133984614 (gatad2ab)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
133984614 (gatad2ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
DUF7573
FYVE
zf-CRD
Zn_ribbon_8
GAPT
LIM
Motif
Other DBs
NCBI-GeneID:
133984614
NCBI-ProteinID:
XP_062280022
LinkDB
All DBs
Position
8:11190660..11214713
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AA seq
652 aa
AA seq
DB search
MSEEVVRQTRSQKRALERDHATIAGPLGDMESKRVKLEKGDVPGSPLALVGSEAEGVKLK
SEQAAKVAASILKSGEVKATIKVEVQTGDEPVDMSTSKSDIKRERQPPSPDDVIVLSDNE
PSSPVMNGHCFTKTDTDKLMKSSPEERERIIKQLKEELRLQEAKLVLLKKLRQSQIQKES
TVQKATGSVATPPPLVRGSITSSKGPLQVTSRSSGTVIPPPLVRGGQHVPSKHNSQIVMP
PLVRGAQVRPIAVTPQQIASLRQQQQHHSGSGPPPLLLAPRASVPNVQVQGQRIIQQGLI
RVANVANSNVMVNIPQVRMQYASPTSLKGSSASPNSNINDSPASRQAAAKLALRKQLEKT
LLEIPPPKPPAPEFNFLPSAANNEFIYLLGLEEVVQKLLEMHGRGNLGPAAAIASSIPKE
PYNCAQCKTDFTSRWRKEKAGTILCDQCMSSNQKKALKAEHTSRLKAAFVKALQQEQEIE
QRILQQSSSSASSVSKTTSSSPSMSKSEVLVSQQYKQVRAAMQHRSVSGHHSSIKQSPSQ
LSHSLQSRGVAHSFTTSQLQSAVTAAALGGGSGKHAAARPLHQGAKVSAGSSNQGNVAAW
RKQSGGNTGVTMAYVNPSLSAHKTSSAVERQREYLLDMIPSRSISQAANTWK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggaggtagtgcgtcaaacgcgcagccagaagcgggctctggagagggaccat
gctactatagcagggcccctgggggacatggagagtaaacgggttaagctggagaagggg
gatgtgcctgggagtccccttgccttggtgggatctgaagctgagggtgtcaagctgaag
agtgagcaggctgcaaaagttgcagccagcatcctaaagtccggggaagtgaaggccacc
atcaaggtggaggtgcagactggagacgagcccgttgatatgagcacatccaaaagtgat
attaagagagagcgacagccaccttcgccagatgatgtgatcgtgttatcagacaacgag
ccatccagtcctgtgatgaatggccactgcttcacgaagactgacacagataaactcatg
aaaagctcccctgaagagagggagcgcatcatcaaacagctgaaagaagaactgcgactc
caagaagccaagctggtgctgctcaaaaaactacgacagagccaaatccagaaggagagc
acagtacagaaggcgactggctctgtggctactcctcctcctctggtgagaggtagcatc
acatcaagcaaaggacccctccaggtgacaagtcgtagctcaggcacggtgatcccccca
ccgctggtgcggggtgggcagcatgtcccgtccaaacacaactctcagattgtcatgcca
cccctggtcagaggagcccaggttaggcctattgcagtgactccgcagcagatagccagt
ctgcgtcagcaacaacaacatcacagcggttcaggcccccctccactcttgctggctccc
agggcttctgtgcccaatgtccaggtccagggccagaggatcattcagcagggactcatt
cgggtggctaatgtggccaacagtaatgtcatggttaacatcccacaggttaggatgcaa
tatgcctctccaaccagcctaaagggctcttcagcgtcgcccaattctaacataaatgat
agtccagccagccggcaggcggccgccaagcttgcacttcgcaagcagttggagaagaca
ctgctggagatcccaccacccaaaccacctgcccccgagttcaacttccttccttcagca
gccaataatgagttcatctacttgttggggttggaagaagtggtgcaaaaacttctggag
atgcatggcaggggtaatctgggcccagctgctgcaattgcaagctccattcccaaagag
ccatacaactgcgcccaatgtaagacggactttacatcccgctggagaaaagagaaggct
gggaccatcctatgtgaccaatgtatgtcgtccaatcagaagaaggccctaaaggctgag
cacaccagtcggctgaaggcagcttttgttaaggcactccaacaggagcaggagattgag
cagcgtatcctccagcagtcttcctcttctgcctcatctgtctctaaaaccacctcgtcc
tctccctcaatgtccaaaagtgaggtgctggtgtcccagcagtacaagcaggtcagggct
gccatgcagcacagatctgtgtctggccaccactccagcattaagcagagtcctagtcag
ctgtcacatagcctccagtctcgtggtgtggcccactcattcaccacctcccagctgcag
agtgcggtgacagcagcagcgctgggaggcgggtcaggtaagcatgctgcagcacgcccg
ctgcaccagggggcaaaggtcagcgccggcagcagtaaccagggcaacgtggctgcctgg
aggaagcagagcggtggaaacacaggtgtgactatggcctatgtgaaccccagcttgtct
gcccataagacaagctctgcagttgagcgtcagcgagagtacctgctggacatgattccc
tcccgttctatctcccaggcagccaacacatggaaataa
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