Scomber scombrus (Atlantic mackerel): 133984634
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Entry
133984634 CDS
T10651
Symbol
rgmd
Name
(RefSeq) RGM domain family, member D
KO
K23096
repulsive guidance molecule A
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133984634 (rgmd)
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Gene cluster
GFIT
Motif
Pfam:
RGM_N
RGM_C
C8-3_MUC4
Motif
Other DBs
NCBI-GeneID:
133984634
NCBI-ProteinID:
XP_062280051
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All DBs
Position
8:11760653..11767907
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AA seq
435 aa
AA seq
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MGRSGPQISAKRQLWDCVTLTMVVLSLLFRSAHCQQCRIQRCNAEYVAFTSPSSGLQEDV
ALDVDYCIALRAYALCTRRQARSCRGDLVYHSAVFRIKELFSQHNCSSDGPTSSAKVPST
SRPAMSELCDYENRVLVSGSAGQQKKYAHCGLFGDPHLRTFRDEFQTCKVEGAWPLIDNR
FLSVQVTNVPVVLGSSATATSKITVIFKSYHGCTDQKVYQATTEDLPLAFQDGTRSGGES
GSLTIVERGGSGVGRQVKIQARYIGTSIIVRRVGSYLTFAIRMPEDTLDFSEDNGGLQLC
LHGCPRNELIKEHTLGRQQPRLPGAGQGTNTELGPLRPPHQVYTVERATAKCRETLQVED
VYFQSCVFDLLTTGDPEFSMAAYSALEDLKALPPSKLKQNPPRTPPPHNRGMSHTSAAVN
SGSLLALLLLILLLL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggggagaagcggacctcaaatctcggctaagcggcagctttgggactgtgtaacgttg
acgatggttgtactttcgctgctgtttcgatcagctcactgccagcagtgtcgaatccag
cgctgcaatgcggagtatgtggcttttacctcaccctctagtgggcttcaggaggacgtg
gctctggatgtggactactgcatcgccctgcgggcctatgccttgtgcacccgccggcag
gcacggagctgccggggtgacctggtctaccattcggctgtcttccgcattaaggagtta
ttctctcagcacaactgctcgagcgacgggcccacctcctctgcaaaggtccccagcacg
tctcggccggccatgtcagagctgtgcgactacgagaatcgggtccttgtctccggctca
gctggtcagcagaagaaatatgcccactgtggattattcggagacccgcacctacggact
ttccgagacgaatttcagacctgcaaggtggaaggggcgtggcctctgatcgataaccgc
ttcctgtcggtgcaggtgaccaatgtgcccgtcgtcctcggctccagcgccacagcgacc
agcaagatcacagtgattttcaagtcgtatcacggctgtacagatcagaaggtgtaccag
gccaccacagaagatctgccgcttgcctttcaggatggaacccgcagcggaggtgagagt
ggcagccttacgatcgtagagcgaggaggctctggcgtgggccggcaggtgaagatacag
gcccgttacatcggcacgtccatcatcgtccggcgtgtgggcagctacctgaccttcgca
atccgcatgccagaagacaccctggacttctcggaggacaatggcggtctgcagctctgc
ctgcacggatgcccacgcaacgagctcatcaaagagcacacgctgggccgccagcagccc
cgcctgccaggtgctgggcagggcaccaacacagagttgggtccactgcggcctcctcac
caagtctatacggtagagcgggccacagccaagtgtagagagactctgcaggtggaggat
gtgtactttcagtcctgcgtgtttgacttgctgaccacaggagaccctgagttctctatg
gcagcctacagcgctctggaggatttaaaggcgctgccacccagtaaactgaagcagaat
ccaccaaggactcctcctccccacaacagagggatgtcacacacatcagcagcagttaac
agcggctccctgctcgcactcttactcctcattctgctgcttttgtaa
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