Scomber scombrus (Atlantic mackerel): 133984670
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Entry
133984670 CDS
T10651
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133984670 (hmg20b)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
133984670 (hmg20b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF4763
HMG_WDHD1
MlaC
Beta-Casp
DUF4164
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
133984670
NCBI-ProteinID:
XP_062280100
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All DBs
Position
8:12044323..12048852
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AA seq
294 aa
AA seq
DB search
MGGIKQEQSEAPQQPKASHSADPPPEEPKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNE
RREHMRARYPDLPFPEITKRLGAEWTRLAPNDKQRYLDEAEREKMQYAQELKEYQQTEAF
HITSAKIQDKRIKKEDTPSVIISTSAGSSLTKPSDLSSRFDIPIFTEEFLDQNKAREAEL
RRLRKANIEFEEQNAVLQRHIKDMYNAKERLEAELGQDEKRTQALHQHWLAIKHTLVNGL
SSVPLPGTGETASFGNLESYLSRLSGVLEGNPHKHRALVTQLCEVLSHLDSEKL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaataaaacaagagcagagtgaagctccgcagcagcccaaagcatcacattca
gctgatccaccaccagaggagcctaagaagagaggctggcccaagggaaagaaacggaag
aaggtgctaccaaatggtcctaaggcaccagtaacaggctatgtccgattcctgaatgaa
aggcgagaacatatgcgggcccgataccctgacctgcctttcccagaaatcaccaagcgg
cttggagcagaatggacacgattagccccaaatgacaaacagcgctatctggatgaggcg
gaaagagagaagatgcagtatgctcaggaactgaaggaatatcagcagactgaggccttt
catatcaccagtgcaaagatacaagacaagaggatcaagaaagaagacaccccatctgtc
attattagcactagtgcagggtcatctttgacaaagccttcagacctctcaagtagattc
gacatccctatcttcacagaggagttcctcgatcagaacaaagctcgagaggctgagctg
cgacggcttcgtaaggccaacattgagtttgaagagcagaatgcagtgctgcagagacac
ataaaggacatgtacaatgctaaagagcgccttgaggctgaactggggcaggacgagaag
cgtacccaagctcttcaccagcactggctggccattaaacacacattggtcaacggcctg
tcatcagtccccctgccaggcacaggagagacagcgtcttttgggaacctggaatcatac
ctgagtcgtctgagcggagtgcttgaaggaaaccctcacaagcaccgggccttggtcacc
cagctttgtgaggttctctctcatctggacagtgagaagttatga
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