Scomber scombrus (Atlantic mackerel): 133984916
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Entry
133984916 CDS
T10651
Symbol
atf6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133984916 (atf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133984916 (atf6)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
133984916 (atf6)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
Rab11-FIP3
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
133984916
NCBI-ProteinID:
XP_062280412
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Position
8:complement(13558353..13592238)
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AA seq
644 aa
AA seq
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MSSELTLNYQHYSVMDSETGIIAIDQGGEWDISLFDELDNLGDADELLDALENAGYASEG
PDLDFDIDIPPWNEVDTSSTCTDGEVSVDSLSPAHTLSSVPSPGSVEALSPYSLQDEAFS
PQFQPSPISVCSESSGLSEIAPPAKKASKRTNQTTRAKPAQQVKRPIQFSPKVSIQPKPL
ITAVPLAHAAAPLQAKTIIIQPLQTTVLPVVKQAPINIQPAPPPGCPIVLSQPSQVLQIQ
TPQAVTANVVTMPTLCHDRPVPVTAPSLVSVTLRSPSSDDESKFSQRQQRMIKNRESASL
SRKKKKEYLLSLEARLKMALSENEVLKSENGNLKRQLEGLLCEHTVLKTTAPKRRAVCLM
VVLVFLVLNVGPMSLFQGGPGSKLQIVPMQHSNRHLLGFSPEAETEVEMGPEPLGSGPSQ
MADSSEDKALMVVKDPIFLRPAPPCQPSVNRTKCIELAHELRGWVHRHEVQQTKSRRMSN
NNHKPTRTILKTGNKEAESAQIVTVQYTETTEEKNPGNELQVYYAPHHTYSDFFDELNRR
GDTFYVVSFRRDHLLLPATDHNKGSRPKMSLVLPAMNINDSIIRDKEFEVMMQIDCEVTD
TRILHIRSSTIPPLLRVNRTETFYQHSPTDNQAAPPVGVLMGSA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgaattaacgttaaattatcaacattactctgtgatggacagtgagacgggc
atcatcgccatcgatcagggaggcgagtgggacattagcctttttgatgagctggacaac
ctgggagatgcagatgagctgctagatgccctggagaatgctggctatgccagtgagggc
ccagacctggactttgatattgacataccaccatggaatgaagtggacacaagcagcacc
tgcacagatggtgaggtgagtgtggactctctctcacctgcccacactctgagctctgtc
ccctctcctggctctgtggaagccctgtccccatactccttacaagatgaagccttctct
ccacagttccagccctctcctatttcagtctgctcagagtccagtggcctttctgaaatt
gcacccccagctaaaaaagcttcaaagaggaccaaccagaccacacgagcaaaaccagcg
cagcaagtcaagagaccgattcaattcagcccaaaggtttccatccagcccaaaccgttg
attacagctgtgcccttggctcacgcagcagctcccctgcaggctaagacaatcatcatc
cagcctctgcagaccactgtgctgcctgttgtcaaacaagctcccatcaacatccagcca
gcgccccctccaggttgtcccatcgtgctgtctcagccaagccaggtgctacagatccag
acaccacaggctgttactgccaatgtggtcaccatgccaactctgtgccatgacaggcct
gtccctgtcactgctccgtcattggtctccgtcacacttcgatccccttcctcagatgat
gaatcaaagttctcccagaggcaacaacgcatgattaagaaccgtgagtcagcatccctg
tctcggaaaaagaagaaagagtatctgctctcactggaagctcgcctaaaaatggcgttg
tctgagaatgaggtgctcaagagtgagaatggcaacctcaagagacagctggagggcctg
ctgtgtgagcatacagtactaaagacaacggcacccaagagaagagctgtgtgtctcatg
gtggtcttggtgttcctggtgcttaatgttggaccaatgagtctgtttcagggtggccca
ggctccaagctccagattgtccccatgcagcacagcaacagacacctgttgggtttctcc
cccgaggcagaaactgaggtcgagatgggcccagagcccctcggcagcggcccctctcag
atggccgacagctctgaggataaggccctgatggtggtaaaggatcctatctttctcaga
ccagctcctccctgccaaccatctgttaacaggaccaagtgcattgagttggcccatgag
ttgaggggttgggtccaccgtcatgaagtgcagcagaccaagtccagacgcatgagtaac
aacaatcacaaacccaccaggaccattctgaaaacggggaataaggaggcagagagtgcc
cagattgtgacggtccaatacacagaaactactgaggaaaagaatcctggcaatgagctg
caggtatactacgcaccacatcacacctatagtgacttctttgatgaactcaatcgtcgt
ggggacactttctacgtagtgtcttttcgcagggatcatcttctacttcctgccaccgac
cacaataaaggaagtcgacccaagatgtctttggtgttgccagctatgaacataaatgac
agcatcatcagggacaaagagttcgaggtgatgatgcagatcgactgtgaagtaacagac
accaggatcctccacatcaggtcttcaaccatcccacctttgcttcgggtcaaccgcaca
gagacgttttatcagcactccccgactgacaaccaggccgcccctcccgttggtgtgctg
atgggttctgcttaa
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