Scomber scombrus (Atlantic mackerel): 133984969
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Entry
133984969 CDS
T10651
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133984969 (usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133984969 (usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133984969 (usp1)
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133984969 (usp1)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133984969 (usp1)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133984969 (usp1)
Ubiquitin system [BR:
ssco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133984969 (usp1)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
133984969 (usp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
133984969
NCBI-ProteinID:
XP_062280483
LinkDB
All DBs
Position
8:complement(24832687..24844739)
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AA seq
813 aa
AA seq
DB search
MPGLQGEHVQGSPIKKSKLSLRFFQKKETKRALDFSEPQPDEPKSVVPVEPEPSSCDQMV
PGPSPCPASPGLLLPPPCEKRESLVPFVGLNNLGNTCYLNSVLQVLYYCPGLIEGVKKLY
NLSKRTEKVKEETDKSEEQSEGLAESLPAHIELLGSFNSLITSVEQLQSSFLLNPDSFSE
GELATPPRKILNTLRQLNPMYEGYLQHDAQEVLQCILGYIQEACDTIRKEQEVEKEDSGV
TEVKTENGDHLCSGSSETEAKTPAEEDGQVSGKRKSDTEVGNAKKKTKSVKSKKSGSEED
GGNRNKPFTRSKRKSSSEITVENTQDKDGEVEEADEGTKKQNKEKGGESDGEGKGEKASK
EADGKRQKRAKLSWLRPSGNQPSIFSKFRSVGKITSMTPKNQTKPEQENELTDDQTENEK
TSREPLPQNTNEDKAAVKNQEGLDMMERLFQGQLVLRTRCLECESFTERREDFQDISVPV
LDDQPSSPDDLSEISPDPKPELKTLKWAIAQFASVERIVGEDKYFCETCHHYTEAERSLL
FDKTPEIITIHLKRFSANSLELDPYAGLSKVNTPLQTPLTLSLEEWCTRPSSAKGQHYQL
FAVVMHSGVTISSGHYTAYVRMSDLKDVKLWDRKETEKEEEEESKAETQVKDEALDYDDG
EVSFSLSGRGQRGASFKAGGKKSEGGVGLLGGQRSLSSYDLGSGGSKHTDKTTTEGSKRR
KNINSQNAEAGLKKEPEAADGADAPAASCGGMEATEQQALSNLLEFEGKWMLFDDSEVRL
FEEEDFLQACSPETCSSSTPYLLFYRRMPEPRR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtctgcagggtgaacacgttcaggggagtcccatcaagaagagcaaactgtct
ctgaggtttttccagaagaaagaaaccaagcgggctctggatttctctgaacctcaacct
gatgaacccaaatctgtggtgccagtggagcctgagccaagcagctgtgatcagatggtg
cccggtccatctccatgtccggcatcgcccggcctgctgctgccgccgccgtgtgagaaa
agagaaagcttggtgccatttgtggggctcaacaacctcggcaacacctgctatttgaac
agcgtcttacaggtgttgtattactgcccggggctcatcgagggcgtaaagaaactgtac
aacctgtctaaaaggacagagaaagtgaaggaggaaactgataaaagtgaagagcagtcc
gagggtttagcagagtccttgccggctcacatcgagcttctcgggagcttcaacagtctg
ataacatccgtggagcagctgcagtccagcttcctgctcaaccccgacagcttcagcgaa
ggagagctcgccacgccgcctcgtaaaatactgaacacactcaggcagcttaaccccatg
tatgaaggctatcttcagcacgacgcccaggaagtcctgcagtgcatcctgggatacatc
caggaggcctgtgacaccatcaggaaggagcaggaggtggagaaggaggacagcggcgtg
actgaggtgaaaacggagaatggtgaccatttgtgctctggcagctccgagacagaagcc
aaaactccagcggaggaggacggccaagtcagcgggaagagaaaaagcgacaccgaagtg
ggaaacgccaaaaagaagacaaaatctgtcaagtcgaagaagtcgggttcagaggaagat
ggcgggaacagaaataaacccttcacccgctccaagaggaagtcctccagtgaaattaca
gttgaaaacacccaggataaagatggagaggtggaggaggcagacgaggggacgaagaag
cagaataaggagaagggaggagagagtgatggtgaggggaaaggtgagaaagcatctaaa
gaagcagacgggaaaagacagaagagggctaagctgagctggctcagaccgtcggggaac
cagcccagcatcttctccaagttccgcagcgtagggaaaatcacctccatgacccccaag
aaccagacgaaaccggagcaggagaacgaactgacggacgaccaaactgagaatgagaag
accagccgagagccattgccccaaaatacgaatgaagataaggcggcagtgaaaaatcaa
gagggtctggacatgatggagcgcttgttccagggtcagctggttctgaggactcgatgt
ctggagtgcgagagcttcacggagaggagagaggacttccaggacatcagtgtgcctgtg
ctcgatgaccaaccgagcagccctgatgacctctcagagatttctccagatcctaaacca
gagctgaagactctgaaatgggccatcgcccagttcgcatcggtggagcgcatcgttggc
gaggacaagtacttctgtgagacctgtcatcattacacagaggcggagagaagtctgctg
tttgacaaaacccctgaaatcatcaccattcacctgaagcgcttttctgccaacagttta
gagctggatccatacgcaggtctgtccaaagtgaacacccccttacagacacctctgacc
ttgtctctggaggagtggtgcacccgtccctcctccgccaaaggtcaacactatcagctg
ttcgccgtggtcatgcacagcggcgtcaccatcagcagcggccactacaccgcctacgtc
cgcatgtcagacctgaaagacgtgaagctgtgggacagaaaagagacggaaaaggaggag
gaagaggagagcaaagcagaaacgcaggtgaaagacgaagcgttggactacgacgacggc
gaggtgtctttcagcctgagcgggaggggacagaggggcgcgagcttcaaggcgggaggc
aagaagtcggagggtggcgtcggactgttgggaggccagaggagtttgtctagttatgac
ctcgggagcggcggcagcaaacacacggataaaacgacgacagagggatccaaacggaga
aaaaacattaacagccagaatgctgaagcaggacttaaaaaggagccagaggctgcagat
ggagctgatgcgccggcggcctcctgcggtgggatggaggcaacggagcagcaggctctg
agtaacctcctggagttcgagggcaaatggatgctgtttgatgactcagaggtgcgcctg
tttgaggaggaggacttcctacaagcatgctcccctgagacgtgctcgtcttcgacaccg
tacctgctgttttacagacggatgcccgagcccagacgctaa
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