Scomber scombrus (Atlantic mackerel): 133984992
Help
Entry
133984992 CDS
T10651
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04137
Mitophagy - animal
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133984992 (usp8)
04137 Mitophagy - animal
133984992 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133984992 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133984992 (usp8)
04121 Ubiquitin system [BR:
ssco04121
]
133984992 (usp8)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133984992 (usp8)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133984992 (usp8)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Others
Others
133984992 (usp8)
Ubiquitin system [BR:
ssco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133984992 (usp8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
133984992
NCBI-ProteinID:
XP_062280511
LinkDB
All DBs
Position
1:27271827..27284546
Genome browser
AA seq
1088 aa
AA seq
DB search
MPAVSTEVKELYLSTSLGELNKKAEIKPDKISTRSYVQSACKIFKAAEECRLDRDEEKAY
VLYMKYLTVYDLIKKRPDFKQQPEYYMTMLGTTSFKRAIEEAEKLSESLKLRYEEVEVRK
KLEEKERQEEKKRREEMSEKDGGRGSPKASSANKKDSKKVKGEQNELKNATSKAAVQPGG
ITAEKLFNMMKDQTITMIVMDARSHTDFEESHIQVPAQTCISVPEEAISPGITVNQIEAK
LPEASKGQWRQRGFVDYIVLLDWFSSVTDLTLGTTLQSLKDALFKWDSITILRSEPMVLE
GGYENWLLFYPMYTTNAKVRPPRQNITSTLPQLNFSYPSLEEPKPPSPPPPEPEVKPEPQ
ELSAPPLVNGVAPAEVPTPTMSVVTDRLPDTVDSSVSGSTNSELDLNKKRPVVDGSSQPA
STAKAYPQFDRTKKPSVRVSDEPKPSQNGSDKDSTQNGPVIPNRSGKPAFGPNTSLSKEE
QSQIHSEAVAVMEKARQEQEKRTQERRLEEERREKERKERELKEREESEKRRKEEEEKRH
QEKKRLERQKAEEEEDKENRVWDEKERRGKEQNSDTPSKSMSLDSPARNHAVSEIKREPL
TRARSEEMGRSVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTV
KHKQPRPTEPDPNRDREREQSKLKRSYSSPDISQDLREEAQKKATAPTTAAVIPTINRET
KPATTKVYSKVEIARPSAAKIRNLNPTFGGLGASFTGLRNLGNTCYMNSILQCLCNTPAM
ADYFNNNYYMEDINRSNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINDQF
AGYDQQDSQELLLFLMDGLHEDLNKADNRKRYKEEDNDHLDDQTAADVAWNKHKLLNESI
IVALFQGQFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNN
KVFCRHCKAHRDSTKKLEIWKVPPIVLVHLKRFSYEGRWKQKLQTYVDFPLDSLDLAQYV
IGPKQTIKRYNLYGVSNHYGGLDGGHYTAYCKNSIKQRWYKFDDHEVTEITTSTVKSSAA
YILFYSSL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtgtccaccgaggtgaaagagctgtatctgtccacatctctgggggagctg
aacaagaaggctgaaatcaagccggacaagatcagcaccagaagctatgttcagagtgcc
tgtaaaatcttcaaggcagcagaggagtgtcgtctggacagagatgaggagaaagcttat
gtactgtacatgaagtatctaacagtatatgacctcatcaagaaaagaccagacttcaag
cagcaaccggagtattacatgaccatgctggggacaaccagctttaagagggccattgaa
gaagcagagaaactctccgaaagccttaaactcaggtatgaagaagttgaggttcgaaaa
aagctggaggagaaggagagacaagaggagaagaaaaggagggaggaaatgagtgagaaa
gatggtggtcgtggctctcccaaagcgtcctcagccaacaagaaggacagcaaaaaggta
aaaggagagcagaatgagcttaagaatgcaacttcaaaagcagcggtacagcctggtggc
atcacagctgagaaacttttcaatatgatgaaggaccagacgattacaatgattgtaatg
gatgcgcgaagccacacagactttgaggagtctcacattcaggtccccgctcagacctgc
atcagcgtgcctgaggaggctatcagcccaggaatcactgtgaatcaaattgaggcaaag
ctgccagaggcgtccaaaggacagtggaggcagcggggatttgtggattatatagtcctg
cttgactggtttagttctgttactgaccttacgctgggcaccaccttgcagagcctcaaa
gatgccctgtttaagtgggacagcatcaccatcctgcgtagtgagccaatggtgctggag
gggggctacgagaactggctcctgttttaccccatgtacacaaccaacgctaaagttcgg
ccccctagacaaaacataaccagcaccctccctcagttaaacttcagttacccatccctt
gaggaaccaaagcctccaagcccgcctccaccagagcctgaggttaaacctgaaccacag
gagctctcagctcctccgctggtgaacggagttgctccagcggaagtccccacacctaca
atgtctgtggttactgacagattaccggacaccgttgattcctctgtctcaggctccaca
aattctgagctggacctaaataaaaagcgacctgtggtagacggatccagccagccagct
tccacagccaaggcctacccacagtttgaccgtaccaagaaaccctctgtgcgggtgtca
gatgagccgaaacccagccagaatgggtcagacaaggactccacccagaacggcccagtt
atccccaaccgctcaggcaaaccagccttcggccccaacacttctctgtctaaagaagaa
caaagtcagatacactctgaggcagtcgcagtgatggagaaggcgcgacaagagcaggaa
aaacgcacccaagagcggcgtctagaggaggagaggcgggagaaggaacggaaggagagg
gagttgaaggaaagggaagaaagtgagaagaggaggaaggaagaagaggagaaaagacat
caggagaaaaagagactggagaggcagaaggcagaagaagaggaggacaaagagaacagg
gtgtgggacgagaaagaaaggaggggaaaagagcagaactctgacacaccctcaaagagt
atgtctctggactcacctgcgcgcaaccatgctgtcagtgaaataaagagggagcccctc
accagagcaagaagtgaggagatgggtcggagtgtgccaggcctgccagacggttggatg
aagttcctcgataccgtgacggggacctacagatattaccattccccaaccaaccgcgtc
cacctgtaccctcctgaagtcactgttcctcagaccccaccctctactccgccaactgtc
aaacataagcagccacgaccaactgagccagaccccaaccgcgaccgagagcgggaacag
tccaaattaaaacgatcctactcctcccctgatattagccaggacctgagagaggaggcc
cagaagaaggctacggccccgaccactgctgctgtcatacccaccatcaacagagagacc
aaacctgccactactaaagtctattctaaagtggagattgcgcgaccgtcagctgctaaa
atccgcaacctgaatcctacatttggaggtctgggtgcatccttcactggccttcgtaac
ctcggcaacacatgctatatgaactccatcttgcaatgcctgtgtaacactcctgccatg
gctgattacttcaacaataattattacatggaggacatcaacaggtccaacatccttggc
cataagggagaggtggcagaagagtttggtgtgatcatgaaggccctgtgggctggtctg
tacaagtgcatcagtccgcgggacttcaaaatcaccatagggaagatcaatgaccagttt
gctggttatgaccagcaagactctcaggagctgctgctgttcctcatggatgggctccat
gaggacctcaacaaggcggataacaggaagcggtacaaggaagaggataacgaccatctg
gatgatcagacagcggccgacgtggcctggaacaaacacaagctgctaaacgagtccatc
attgtagcgctgttccaggggcagttcaagtccaccgtgcagtgtctgacctgccaccgc
aagtcccgaacctttgagaccttcatgtacctgtcgctgcctctggcctccaccagcaag
tgctccctgcaggattgtctgagactgttctccaaggaggagaagctgaccgataacaac
aaggtgttctgcagacactgcaaagctcacagagattccaccaagaaactggagatctgg
aaggtccctcccattgtcctcgtgcacctgaaacgcttctcctatgagggccgatggaag
cagaagctgcagacgtatgtcgactttcctctagacagtctggatctggcccagtacgtc
attggacccaagcagaccataaagagatacaacctctatggagtgtctaaccactacggg
ggcttagatggtggccattacacagcctactgtaagaacagcatcaaacagcgctggtac
aagtttgatgaccacgaggttaccgaaattaccacctccaccgtcaagtcctcagcagcc
tacatcttgttttactcctccctgtga
DBGET
integrated database retrieval system
