Scomber scombrus (Atlantic mackerel): 133985016
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Entry
133985016 CDS
T10651
Symbol
sbno2b
Name
(RefSeq) si:ch73-63e15.2 isoform X1
KO
K26273
protein strawberry notch
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133985016 (sbno2b)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133985016 (sbno2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-GeneID:
133985016
NCBI-ProteinID:
XP_062280540
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All DBs
Position
8:complement(10782467..10843659)
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AA seq
1631 aa
AA seq
DB search
MPTLPSALAMDGENYLHPEGPQLDSSLFPVAPSNMESSIYASSGSWGAFSQQAGYIHRPM
QSGNQQYHLNSSTTTATPDVNIDMYSGFSDMDFSSLNLPRNGEFSQDLSCIDDLSTNSLF
SSPADSLSEYADTQSFISTDNLDTVPTIWDVNTSTTTTPAQSQLELNGTSRFHGLASLDD
ITAIISTPPLGGFQQAQRTQSPPVEEEDAEEEETEELGHVDTYAEYRPSKSTIGISHPDI
VVETNTLSSVPPPDITYTLSIPELTINSGQLSALQLEAIIYACQQHEVILQNNQRAGFLI
GDGAGVGKGRTVAGIILENYLKGRKKALWFSISNDLKFDAERDLKDIEAPTIPVHALNKI
KYGDTATSEGVLFATYSALIGESQAGGQRRTRIKQILDWCKPDFDGVIIFDECHKAKNAT
STKMGKAVLDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFDDFLHAIE
KRGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRIEEIGLDSDFKLVYNKAAKLWAEALQV
FMRAADELGLVSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAQKELEAGKCIVIGLQS
TGESRTREVLDENDGHLDRFVSAAEGVFQSLVTKHFPSEKQRREKAPGNKRKRKPRGRQT
KVPKHTVDSGGVINISDDSSSDSDGMDTDSNSSPDSLLDNDDVIFVNHTSYQTARIEEMK
QDLLNKISDVGKELPLNTLDELIDKFGGPDKVSEMTGRKGRVVRRPDGSVRYESRAEQGL
TIDHINLKEKDRFMSGEKLVAIISEAASSGISLQADKRVKNQRRRVHMTLELPWSADRAI
QQFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKY
NFENKYGTKALDKITKAILGHIDNKVPPPKTYPGGDGMFFRDMKHGMMDVGILCREPRFG
INTEKDCSITKFLNRILGLEVHKQNHLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGND
EIYEEKQETFLTVGNPQDGQVVLYKISVDRGMPWDEAYNRSLKLSGPEEGFYLSIKLRGN
NPCVLLAEQGRGKNFNVYKPNIGKQTHPESLDKLHQRYRKATPEEAKETWENQFTFSFKK
CSHANWNGKCKIIEEGQVCLQGMRLRQYHMLCGALLRVWKRVSDVVSDITSTSILQIVRL
KTKQHNKQVGIKIPENCVARVREELLLMDEEVKRRRKEKEKQAVEQRLAEERMRKMEQDN
KHLLANLFNQKPMLNQSLIQSLAQSQILKQNQKLNQNPMQRTQTGNMSQLMRLQAQAQAQ
TQSALQQPPQNLTLLSLQRNPSQAQQRTPNSWPNNSTTNSNQNRLTNTVNPSPNFPSFYP
QAFLTSFPQQKNQSFPLHQTALSPNVSSKNPLDDILDLTVSSPSPSPDTTEGGLNLDSLT
HSAAFGEDFNLESLISQNAPNAQIQQPLLLQQQQQQQQQQHLQTTQQQNHSLMTNNHQDL
LDLLDLPLSPQIPAQKASPSSSTSSGSSSTSSASNVSNNLVPHVSSGLLPAPTLIPPSSS
SSLFSSPSPSSSLFSNSSPHFSSSYLLPQSDSLSLPNGHCSPDPLDVREALNSMLQAGPD
RKSVIHYRQPE
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctcccctcagcgctggccatggacggggagaactacctgcatccagaaggc
cctcagctggacagcagcttgttccctgtggccccctctaacatggagagttcaatatat
gcctcctctggttcctggggagccttctctcagcaggctggatacatacaccgccctatg
caatctggaaaccagcaataccacttgaacagcagcactaccaccgccactccggatgtg
aacattgacatgtactcgggattctctgacatggacttttccagcctcaacctcccgagg
aatggcgaattttcccaggacctgtcctgcattgatgacctctccacaaactctctgttc
tcctctccggctgactctctgtcggaatatgctgatacccagtccttcatcagcacagac
aacctggacacggtgcccaccatctgggacgtcaacactagtacaaccaccacaccagca
cagagccagctagagctgaatggcaccagcaggtttcatggcttggccagtttggatgat
ataactgctattatcagcaccccacctttaggaggatttcagcaggctcagagaacccag
tcaccaccagtagaggaagaggatgctgaagaggaggagacagaggaactgggacatgta
gacacatatgctgagtacagaccttccaaatccactataggaatttctcatcctgacata
gtggtggagaccaacacgctctccagtgtccctcctcctgacatcacatacactctgtct
atccccgagttaactattaacagtggccagctgtccgctctgcagctagaggccatcatc
tatgcctgccagcaacacgaggtgatacttcagaacaaccagagagcaggttttctgatc
ggagatggggcaggggtcggaaagggacgcactgtggcgggaatcatcctggagaactac
cttaagggaaggaagaaagcgctatggttcagcatatcaaatgacctgaaatttgatgca
gagagagatctcaaagacatagaagcaccgactattcctgtgcatgccttaaacaagata
aagtatggagacacagctacctcagaaggagtcctgtttgcaacttactctgcgctgatt
ggagagagccaggcaggagggcagcggcggacgagaattaaacagatcctggactggtgc
aagccagactttgatggagttattatttttgatgaatgccacaaagccaagaatgccaca
tctacaaagatgggcaaggcagtgcttgacctgcaaaacaagctgccaagggccagagtg
gtatatgccagtgccacaggtgcctctgagccaaagaacatgatctatatgagccgcctg
ggaatctggggtgagggcacgcccttcagaacctttgatgacttcctgcacgccatcgaa
aagagaggtgttggtgccatggagattgttgctatggacatgaaagtgagcgggatgtac
attgccaggcagctgagcttctcaggtgtttctttccgcattgaagagatcggactggac
agcgacttcaaactggtctacaacaaagctgccaaactgtgggcagaggcgctgcaagtg
ttcatgcgtgcagctgacgaactgggcctggtcagcaggaagtctctgtgggggcagttt
tggtcatctcaccagcgctttttcaaatacctctgtatcgctgccaaggtccgctgcctg
gtggagctggcccagaaagagctggaggctggaaagtgcatcgttattggcctgcagtct
actggagagtcccgcaccagagaagtcctggatgagaatgacggccatcttgacagattt
gtgtctgcagcagagggagtattccagtctctcgtaacaaaacatttcccttcagagaaa
cagagaagagagaaagcaccagggaataagagaaaacgaaaacctcgaggtcgccagacc
aaggtacccaagcacacagtggacagcggcggtgtgatcaacatcagtgatgacagcagt
agtgactctgatggcatggacaccgactccaactcctcaccagactccctgctagacaat
gacgatgtcatctttgtgaaccacactagctaccagacagccaggatagaggagatgaag
caggacctcctcaacaaaatatccgacgtgggaaaagaactacctctcaataccttggac
gagctcatcgataagtttggaggaccagataaagtctcagagatgactggtcgtaagggt
cgtgtggtgcggcgtcctgatggcagcgtccgctatgagtcacgggctgagcagggtctt
accatagaccacatcaacctcaaggagaaagaccgcttcatgagtggagagaagttggtg
gccatcatctcagaggcagccagctccgggatttccctgcaggcggataagcgagtgaaa
aaccagaggcgcagggtccacatgaccctggagctgccttggagtgcagacagagccatt
cagcagtttggtcgcacccatcggtccaatcaggtgacggccccagaatacatcttcctc
atctcagaattggctggggagagacgtttcgcctccatagtggctaaaagactggagagc
ttgggtgcattaacccacggagacagaagagccactgaatccagagacctgagcaagtac
aattttgagaacaagtacggtaccaaggctctggataaaatcaccaaagcaatccttggc
cacattgataacaaggtgccccctcccaaaacgtaccctgggggtgacggcatgttcttc
agagatatgaaacatggaatgatggatgtgggcatcctctgtagggagcctcgctttggg
atcaatactgagaaagactgcagcatcaccaagttcctgaatcgcatcctgggccttgag
gttcacaagcagaaccatctcttccagtacttcactgacaattttgactacctaattgag
aaggacaagaaggagggcaaatatgacatgggaatcctagatcttgccccaggtaacgat
gagatctatgaagagaagcaggaaactttcttgacagttggaaaccctcaagatggacag
gttgttctctataagatcagtgtggacagaggtatgccctgggatgaggcctacaacagg
tcactgaaactcagtggtcccgaggagggattctacctgtccattaagctgcgagggaac
aacccatgtgtgctgctggctgaacaaggacgaggcaagaacttcaacgtctacaagccc
aatatcggcaagcagacccatcctgagagcctcgacaagctgcatcaacgctaccggaag
gcgactcccgaggaagccaaggagacctgggagaaccagttcaccttctccttcaagaag
tgcagccatgccaactggaatgggaagtgtaagataattgaagaaggtcaggtgtgtctg
cagggcatgcgcctccgtcagtaccacatgctgtgtggtgctctcttacgcgtgtggaag
cgcgtatccgacgtggtgtctgacattaccagcaccagcatcctgcagattgtccgcctt
aaaactaagcagcataacaagcaagtcggtatcaagatcccagagaactgcgtggcccgt
gtgcgtgaagagctgttgctaatggacgaggaggtgaagaggaggcgcaaggagaaagag
aagcaagctgtggagcagcggctggctgaggagcgcatgcgtaaaatggagcaggacaat
aaacaccttctggcaaatctgttcaaccaaaaacccatgctcaaccagtcccttatccag
tccctcgcccagagccagatcctcaaacagaaccagaaactgaaccaaaacccaatgcaa
agaacacaaactgggaacatgtctcagctaatgagattgcaggcccaggcccaggcccag
acccagtccgctttgcagcagcccccccagaatctaaccctgttgtccttacagagaaat
cctagccaagcccagcaaaggactcccaacagctggcccaacaattccaccaccaacagc
aaccagaaccgtctgaccaacacggtcaaccccagccccaatttcccctcgttttacccc
caggccttcctaacctcttttccacagcaaaagaaccagtcttttccactccatcagact
gcactgtctcccaacgtgtcttccaagaatcccctggacgatatcttggatctgactgtg
agctcaccgtccccttcaccggacaccacagaaggcgggctgaatctggacagtctgaca
cactctgcagcattcggagaagactttaatctggagtctctgatctctcagaatgcgccg
aacgcccaaatacagcagcctcttttgctacagcagcagcaacaacagcagcagcagcaa
catctacagacgacacagcagcagaaccacagcttgatgaccaataaccaccaagactta
ttagatttattggacttgcccctgtctccccagatacccgcacagaaagccagcccttcg
tcctctacctcctccggctcttcctccacgtcctccgcctccaatgtgtcaaacaacctg
gtcccacacgtctcctccggcctcctgcccgcgccgacactcatcccaccgtcgtcgtcc
tcctctctcttctccagcccgtccccctcctcttctctgttctccaactcctcccctcac
ttctcctccagctatctcctcccccagtcagactctctttccttacccaacggccactgc
agtcccgaccctcttgacgtccgcgaggctctgaacagcatgctacaggccggaccagac
cgcaagtctgtcattcactaccggcaaccagaataa
DBGET
integrated database retrieval system
